==1031222== Memcheck, a memory error detector ==1031222== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1031222== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1031222== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==1031222== Parent PID: 1029260 ==1031222== ==1031222== ==1031222== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1031222== Open file descriptor 12: ==1031222== at 0xECD022D: pipe (pipe.c:29) ==1031222== by 0x18BE907D: ??? ==1031222== by 0x141EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1031222== by 0x109B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1031222== by 0x10949D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1031222== by 0xF640D38: PetscInitialize (pinit.c:924) ==1031222== by 0xE5D558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1031222== by 0xE5D55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1031222== by 0x12EA82: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1031222== by 0x128B2F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1031222== by 0x12B0BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1031222== by 0x12AF5D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1031222== by 0x12B5F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1031222== by 0x126E60: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==1031222== ==1031222== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1031222== at 0xECD4BCC: __open_nocancel (open64_nocancel.c:39) ==1031222== by 0xEC58C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1031222== by 0xE60D822: ??? ==1031222== by 0xE60D96F: ??? ==1031222== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1031222== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1031222== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1031222== by 0x141EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1031222== by 0x109B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1031222== by 0x10949D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1031222== by 0xF640D38: PetscInitialize (pinit.c:924) ==1031222== by 0xE5D558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1031222== by 0xE5D55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1031222== by 0x12EA82: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1031222== by 0x128B2F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1031222== by 0x12B0BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1031222== by 0x12AF5D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1031222== by 0x12B5F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1031222== by 0x126E60: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==1031222== ==1031222== Open file descriptor 116: ==1031222== ==1031222== ==1031222== Open file descriptor 112: ==1031222== ==1031222== ==1031222== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==1031222== ==1031222== ==1031222== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1031222== ==1031222== ==1031222== ==1031222== HEAP SUMMARY: ==1031222== in use at exit: 700,775 bytes in 9,378 blocks ==1031222== total heap usage: 1,125,924 allocs, 1,116,546 frees, 1,430,824,474 bytes allocated ==1031222== ==1031222== LEAK SUMMARY: ==1031222== definitely lost: 0 bytes in 0 blocks ==1031222== indirectly lost: 0 bytes in 0 blocks ==1031222== possibly lost: 0 bytes in 0 blocks ==1031222== still reachable: 56 bytes in 3 blocks ==1031222== suppressed: 700,719 bytes in 9,375 blocks ==1031222== Reachable blocks (those to which a pointer was found) are not shown. ==1031222== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1031222== ==1031222== For lists of detected and suppressed errors, rerun with: -s ==1031222== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)