==1038543== Memcheck, a memory error detector ==1038543== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1038543== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1038543== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==1038543== Parent PID: 1029260 ==1038543== ==1038543== ==1038543== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1038543== Open file descriptor 12: ==1038543== at 0x102B022D: pipe (pipe.c:29) ==1038543== by 0x18BE707D: ??? ==1038543== by 0x1414E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1038543== by 0xFAD3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1038543== by 0xFA6CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1038543== by 0xE763D38: PetscInitialize (pinit.c:924) ==1038543== by 0xE5D558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1038543== by 0xE5D55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1038543== by 0x230AFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1038543== by 0x228E97: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1038543== by 0x22C882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1038543== by 0x22C723: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1038543== by 0x22CDB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1038543== by 0x224C80: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==1038543== ==1038543== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1038543== at 0x102B4BCC: __open_nocancel (open64_nocancel.c:39) ==1038543== by 0x10238C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1038543== by 0xE60D822: ??? ==1038543== by 0xE60D96F: ??? ==1038543== by 0x141F36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1038543== by 0x141F3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1038543== by 0x141A9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1038543== by 0x1414E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1038543== by 0xFAD3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1038543== by 0xFA6CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1038543== by 0xE763D38: PetscInitialize (pinit.c:924) ==1038543== by 0xE5D558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1038543== by 0xE5D55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1038543== by 0x230AFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1038543== by 0x228E97: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1038543== by 0x22C882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1038543== by 0x22C723: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1038543== by 0x22CDB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1038543== by 0x224C80: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==1038543== ==1038543== Open file descriptor 116: ==1038543== ==1038543== ==1038543== Open file descriptor 112: ==1038543== ==1038543== ==1038543== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==1038543== ==1038543== ==1038543== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1038543== ==1038543== ==1038543== ==1038543== HEAP SUMMARY: ==1038543== in use at exit: 700,704 bytes in 9,374 blocks ==1038543== total heap usage: 8,968,876 allocs, 8,959,502 frees, 2,194,792,833 bytes allocated ==1038543== ==1038543== LEAK SUMMARY: ==1038543== definitely lost: 0 bytes in 0 blocks ==1038543== indirectly lost: 0 bytes in 0 blocks ==1038543== possibly lost: 0 bytes in 0 blocks ==1038543== still reachable: 56 bytes in 3 blocks ==1038543== suppressed: 700,648 bytes in 9,371 blocks ==1038543== Reachable blocks (those to which a pointer was found) are not shown. ==1038543== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1038543== ==1038543== For lists of detected and suppressed errors, rerun with: -s ==1038543== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)