==1050339== Memcheck, a memory error detector ==1050339== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1050339== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1050339== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestFibreReaderAbilityExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1050339== Parent PID: 1029260 ==1050339== ==1050339== ==1050339== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1050339== Open file descriptor 12: ==1050339== at 0xA52722D: pipe (pipe.c:29) ==1050339== by 0x140CE07D: ??? ==1050339== by 0xF8DA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1050339== by 0xBC38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1050339== by 0xBBD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1050339== by 0xA8C8D38: PetscInitialize (pinit.c:924) ==1050339== by 0x9E1058B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1050339== by 0x9E105D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1050339== by 0x132530: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1050339== by 0x12B5DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1050339== by 0x12E3D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1050339== by 0x12E2CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1050339== by 0x12E8E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1050339== by 0x129DE0: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==1050339== ==1050339== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1050339== at 0xA52BBCC: __open_nocancel (open64_nocancel.c:39) ==1050339== by 0xA4AFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1050339== by 0x9E48822: ??? ==1050339== by 0x9E4896F: ??? ==1050339== by 0xF97F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1050339== by 0xF97F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1050339== by 0xF935922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1050339== by 0xF8DA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1050339== by 0xBC38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1050339== by 0xBBD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1050339== by 0xA8C8D38: PetscInitialize (pinit.c:924) ==1050339== by 0x9E1058B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1050339== by 0x9E105D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1050339== by 0x132530: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1050339== by 0x12B5DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1050339== by 0x12E3D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1050339== by 0x12E2CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1050339== by 0x12E8E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1050339== by 0x129DE0: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==1050339== ==1050339== Open file descriptor 116: ==1050339== ==1050339== ==1050339== Open file descriptor 112: ==1050339== ==1050339== ==1050339== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestFibreReaderAbilityExtendedBidomainProblem_valgrind.txt ==1050339== ==1050339== ==1050339== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1050339== ==1050339== ==1050339== ==1050339== HEAP SUMMARY: ==1050339== in use at exit: 700,759 bytes in 9,377 blocks ==1050339== total heap usage: 117,864 allocs, 108,487 frees, 1,357,923,488 bytes allocated ==1050339== ==1050339== LEAK SUMMARY: ==1050339== definitely lost: 0 bytes in 0 blocks ==1050339== indirectly lost: 0 bytes in 0 blocks ==1050339== possibly lost: 0 bytes in 0 blocks ==1050339== still reachable: 24 bytes in 2 blocks ==1050339== suppressed: 700,735 bytes in 9,375 blocks ==1050339== Reachable blocks (those to which a pointer was found) are not shown. ==1050339== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1050339== ==1050339== For lists of detected and suppressed errors, rerun with: -s ==1050339== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)