==1035027== Memcheck, a memory error detector ==1035027== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1035027== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1035027== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1035027== Parent PID: 1029260 ==1035027== ==1035027== ==1035027== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1035027== Open file descriptor 12: ==1035027== at 0xF16922D: pipe (pipe.c:29) ==1035027== by 0x18BE607D: ??? ==1035027== by 0x141E94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1035027== by 0x10A97418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1035027== by 0x10A30D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1035027== by 0xF727D38: PetscInitialize (pinit.c:924) ==1035027== by 0xE98558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1035027== by 0xE9855D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1035027== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1035027== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1035027== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1035027== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1035027== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1035027== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1035027== ==1035027== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1035027== at 0xF16DBCC: __open_nocancel (open64_nocancel.c:39) ==1035027== by 0xF0F1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1035027== by 0xE9BD822: ??? ==1035027== by 0xE9BD96F: ??? ==1035027== by 0x1428E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1035027== by 0x1428E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1035027== by 0x14244922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1035027== by 0x141E92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1035027== by 0x10A97418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1035027== by 0x10A30D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1035027== by 0xF727D38: PetscInitialize (pinit.c:924) ==1035027== by 0xE98558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1035027== by 0xE9855D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1035027== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1035027== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1035027== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1035027== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1035027== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1035027== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1035027== ==1035027== Open file descriptor 116: ==1035027== ==1035027== ==1035027== Open file descriptor 112: ==1035027== ==1035027== ==1035027== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==1035027== ==1035027== ==1035027== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1035027== ==1035027== ==1035027== ==1035027== HEAP SUMMARY: ==1035027== in use at exit: 700,704 bytes in 9,374 blocks ==1035027== total heap usage: 2,341,193 allocs, 2,331,819 frees, 1,789,320,792 bytes allocated ==1035027== ==1035027== LEAK SUMMARY: ==1035027== definitely lost: 0 bytes in 0 blocks ==1035027== indirectly lost: 0 bytes in 0 blocks ==1035027== possibly lost: 0 bytes in 0 blocks ==1035027== still reachable: 56 bytes in 3 blocks ==1035027== suppressed: 700,648 bytes in 9,371 blocks ==1035027== Reachable blocks (those to which a pointer was found) are not shown. ==1035027== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1035027== ==1035027== For lists of detected and suppressed errors, rerun with: -s ==1035027== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)