==1035802== Memcheck, a memory error detector ==1035802== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1035802== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1035802== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1035802== Parent PID: 1029260 ==1035802== ==1035802== ==1035802== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1035802== Open file descriptor 12: ==1035802== at 0xEDFB22D: pipe (pipe.c:29) ==1035802== by 0x18BE707D: ??? ==1035802== by 0x141EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1035802== by 0x10A97418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1035802== by 0x10A30D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1035802== by 0xF727D38: PetscInitialize (pinit.c:924) ==1035802== by 0xE5D558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1035802== by 0xE5D55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1035802== by 0x1E6038: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1035802== by 0x1DC313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1035802== by 0x1DFC4E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1035802== by 0x1DFAEE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1035802== by 0x1E0185: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1035802== by 0x1DA600: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1035802== ==1035802== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1035802== at 0xEDFFBCC: __open_nocancel (open64_nocancel.c:39) ==1035802== by 0xED83C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1035802== by 0xE60D822: ??? ==1035802== by 0xE60D96F: ??? ==1035802== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1035802== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1035802== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1035802== by 0x141EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1035802== by 0x10A97418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1035802== by 0x10A30D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1035802== by 0xF727D38: PetscInitialize (pinit.c:924) ==1035802== by 0xE5D558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1035802== by 0xE5D55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1035802== by 0x1E6038: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1035802== by 0x1DC313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1035802== by 0x1DFC4E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1035802== by 0x1DFAEE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1035802== by 0x1E0185: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1035802== by 0x1DA600: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1035802== ==1035802== Open file descriptor 116: ==1035802== ==1035802== ==1035802== Open file descriptor 112: ==1035802== ==1035802== ==1035802== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==1035802== ==1035802== ==1035802== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1035802== ==1035802== ==1035802== ==1035802== HEAP SUMMARY: ==1035802== in use at exit: 700,720 bytes in 9,375 blocks ==1035802== total heap usage: 11,679,235 allocs, 11,669,860 frees, 2,221,739,615 bytes allocated ==1035802== ==1035802== LEAK SUMMARY: ==1035802== definitely lost: 0 bytes in 0 blocks ==1035802== indirectly lost: 0 bytes in 0 blocks ==1035802== possibly lost: 0 bytes in 0 blocks ==1035802== still reachable: 72 bytes in 4 blocks ==1035802== suppressed: 700,648 bytes in 9,371 blocks ==1035802== Reachable blocks (those to which a pointer was found) are not shown. ==1035802== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1035802== ==1035802== For lists of detected and suppressed errors, rerun with: -s ==1035802== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)