==1050079== Memcheck, a memory error detector ==1050079== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1050079== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1050079== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1050079== Parent PID: 1029260 ==1050079== ==1050079== ==1050079== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1050079== Open file descriptor 12: ==1050079== at 0x11A6822D: pipe (pipe.c:29) ==1050079== by 0x1A8C907D: ??? ==1050079== by 0x15A334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1050079== by 0x11372418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1050079== by 0x1130BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1050079== by 0xFFE2D38: PetscInitialize (pinit.c:924) ==1050079== by 0xFEB658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1050079== by 0xFEB65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1050079== by 0x12A553: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1050079== by 0x1246FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1050079== by 0x126B38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1050079== by 0x126A34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1050079== by 0x127047: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1050079== by 0x122F00: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==1050079== ==1050079== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1050079== at 0x11A6CBCC: __open_nocancel (open64_nocancel.c:39) ==1050079== by 0x119F0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1050079== by 0x1126C822: ??? ==1050079== by 0x1126C96F: ??? ==1050079== by 0x15AD86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1050079== by 0x15AD8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1050079== by 0x15A8E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1050079== by 0x15A332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1050079== by 0x11372418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1050079== by 0x1130BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1050079== by 0xFFE2D38: PetscInitialize (pinit.c:924) ==1050079== by 0xFEB658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1050079== by 0xFEB65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1050079== by 0x12A553: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1050079== by 0x1246FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1050079== by 0x126B38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1050079== by 0x126A34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1050079== by 0x127047: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1050079== by 0x122F00: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==1050079== ==1050079== Open file descriptor 116: ==1050079== ==1050079== ==1050079== Open file descriptor 112: ==1050079== ==1050079== ==1050079== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==1050079== ==1050079== ==1050079== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1050079== ==1050079== ==1050079== ==1050079== HEAP SUMMARY: ==1050079== in use at exit: 700,871 bytes in 9,379 blocks ==1050079== total heap usage: 1,617,702 allocs, 1,608,323 frees, 1,472,788,247 bytes allocated ==1050079== ==1050079== LEAK SUMMARY: ==1050079== definitely lost: 0 bytes in 0 blocks ==1050079== indirectly lost: 0 bytes in 0 blocks ==1050079== possibly lost: 0 bytes in 0 blocks ==1050079== still reachable: 136 bytes in 4 blocks ==1050079== suppressed: 700,735 bytes in 9,375 blocks ==1050079== Reachable blocks (those to which a pointer was found) are not shown. ==1050079== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1050079== ==1050079== For lists of detected and suppressed errors, rerun with: -s ==1050079== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)