==1049345== Memcheck, a memory error detector ==1049345== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1049345== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1049345== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==1049345== Parent PID: 1029260 ==1049345== ==1049345== ==1049345== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1049345== Open file descriptor 12: ==1049345== at 0x1016422D: pipe (pipe.c:29) ==1049345== by 0x1A8C907D: ??? ==1049345== by 0x14A184CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1049345== by 0xFA6E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1049345== by 0xFA07D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1049345== by 0xE6FED38: PetscInitialize (pinit.c:924) ==1049345== by 0xE57058B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1049345== by 0xE5705D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1049345== by 0x1930DD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1049345== by 0x189E77: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1049345== by 0x18D1E2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1049345== by 0x18D082: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1049345== by 0x18D719: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1049345== by 0x185C60: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==1049345== ==1049345== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1049345== at 0x10168BCC: __open_nocancel (open64_nocancel.c:39) ==1049345== by 0x100ECC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1049345== by 0xE5A8822: ??? ==1049345== by 0xE5A896F: ??? ==1049345== by 0x14ABD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1049345== by 0x14ABD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1049345== by 0x14A73922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1049345== by 0x14A182DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1049345== by 0xFA6E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1049345== by 0xFA07D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1049345== by 0xE6FED38: PetscInitialize (pinit.c:924) ==1049345== by 0xE57058B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1049345== by 0xE5705D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1049345== by 0x1930DD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1049345== by 0x189E77: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1049345== by 0x18D1E2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1049345== by 0x18D082: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1049345== by 0x18D719: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1049345== by 0x185C60: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==1049345== ==1049345== Open file descriptor 116: ==1049345== ==1049345== ==1049345== Open file descriptor 112: ==1049345== ==1049345== ==1049345== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==1049345== ==1049345== ==1049345== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1049345== ==1049345== ==1049345== ==1049345== HEAP SUMMARY: ==1049345== in use at exit: 700,855 bytes in 9,379 blocks ==1049345== total heap usage: 755,492 allocs, 746,113 frees, 1,387,573,677 bytes allocated ==1049345== ==1049345== LEAK SUMMARY: ==1049345== definitely lost: 0 bytes in 0 blocks ==1049345== indirectly lost: 0 bytes in 0 blocks ==1049345== possibly lost: 0 bytes in 0 blocks ==1049345== still reachable: 120 bytes in 4 blocks ==1049345== suppressed: 700,735 bytes in 9,375 blocks ==1049345== Reachable blocks (those to which a pointer was found) are not shown. ==1049345== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1049345== ==1049345== For lists of detected and suppressed errors, rerun with: -s ==1049345== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)