==1049425== Memcheck, a memory error detector ==1049425== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1049425== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1049425== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1049425== Parent PID: 1029260 ==1049425== ==1049425== ==1049425== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1049425== Open file descriptor 12: ==1049425== at 0x11CF622D: pipe (pipe.c:29) ==1049425== by 0x1A8CA07D: ??? ==1049425== by 0x15A7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1049425== by 0x11602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1049425== by 0x1159BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1049425== by 0x10290D38: PetscInitialize (pinit.c:924) ==1049425== by 0x1010258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1049425== by 0x101025D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1049425== by 0x1412CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1049425== by 0x13A4FF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1049425== by 0x13D44E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1049425== by 0x13D2EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1049425== by 0x13D985: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1049425== by 0x138830: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1049425== ==1049425== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1049425== at 0x11CFABCC: __open_nocancel (open64_nocancel.c:39) ==1049425== by 0x11C7EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1049425== by 0x1013A822: ??? ==1049425== by 0x1013A96F: ??? ==1049425== by 0x15B226DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1049425== by 0x15B22938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1049425== by 0x15AD8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1049425== by 0x15A7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1049425== by 0x11602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1049425== by 0x1159BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1049425== by 0x10290D38: PetscInitialize (pinit.c:924) ==1049425== by 0x1010258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1049425== by 0x101025D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1049425== by 0x1412CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1049425== by 0x13A4FF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1049425== by 0x13D44E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1049425== by 0x13D2EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1049425== by 0x13D985: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1049425== by 0x138830: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1049425== ==1049425== Open file descriptor 116: ==1049425== ==1049425== ==1049425== Open file descriptor 112: ==1049425== ==1049425== ==1049425== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==1049425== ==1049425== ==1049425== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1049425== ==1049425== ==1049425== ==1049425== HEAP SUMMARY: ==1049425== in use at exit: 700,759 bytes in 9,377 blocks ==1049425== total heap usage: 520,866 allocs, 511,489 frees, 1,562,033,321 bytes allocated ==1049425== ==1049425== LEAK SUMMARY: ==1049425== definitely lost: 0 bytes in 0 blocks ==1049425== indirectly lost: 0 bytes in 0 blocks ==1049425== possibly lost: 0 bytes in 0 blocks ==1049425== still reachable: 24 bytes in 2 blocks ==1049425== suppressed: 700,735 bytes in 9,375 blocks ==1049425== Reachable blocks (those to which a pointer was found) are not shown. ==1049425== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1049425== ==1049425== For lists of detected and suppressed errors, rerun with: -s ==1049425== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)