==1074720== Memcheck, a memory error detector ==1074720== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1074720== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1074720== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==1074720== Parent PID: 1072768 ==1074720== ==1074720== ==1074720== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1074720== Open file descriptor 12: ==1074720== at 0xEC1F22D: pipe (pipe.c:29) ==1074720== by 0x18B2307D: ??? ==1074720== by 0x1412A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074720== by 0x108ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074720== by 0x10886D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074720== by 0xF57DD38: PetscInitialize (pinit.c:924) ==1074720== by 0xE52468F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074720== by 0xE5246DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074720== by 0x12CC48: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1074720== by 0x126C8F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074720== by 0x129252: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074720== by 0x1290F3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074720== by 0x129789: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074720== by 0x124FC0: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==1074720== ==1074720== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1074720== at 0xEC23BCC: __open_nocancel (open64_nocancel.c:39) ==1074720== by 0xEBA7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1074720== by 0xE55C822: ??? ==1074720== by 0xE55C96F: ??? ==1074720== by 0x141CF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074720== by 0x141CF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074720== by 0x14185922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074720== by 0x1412A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074720== by 0x108ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074720== by 0x10886D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074720== by 0xF57DD38: PetscInitialize (pinit.c:924) ==1074720== by 0xE52468F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074720== by 0xE5246DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074720== by 0x12CC48: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1074720== by 0x126C8F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074720== by 0x129252: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074720== by 0x1290F3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074720== by 0x129789: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074720== by 0x124FC0: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==1074720== ==1074720== Open file descriptor 116: ==1074720== ==1074720== ==1074720== Open file descriptor 112: ==1074720== ==1074720== ==1074720== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==1074720== ==1074720== ==1074720== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1074720== ==1074720== ==1074720== ==1074720== HEAP SUMMARY: ==1074720== in use at exit: 700,775 bytes in 9,378 blocks ==1074720== total heap usage: 1,125,924 allocs, 1,116,546 frees, 1,430,824,283 bytes allocated ==1074720== ==1074720== LEAK SUMMARY: ==1074720== definitely lost: 0 bytes in 0 blocks ==1074720== indirectly lost: 0 bytes in 0 blocks ==1074720== possibly lost: 0 bytes in 0 blocks ==1074720== still reachable: 56 bytes in 3 blocks ==1074720== suppressed: 700,719 bytes in 9,375 blocks ==1074720== Reachable blocks (those to which a pointer was found) are not shown. ==1074720== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1074720== ==1074720== For lists of detected and suppressed errors, rerun with: -s ==1074720== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)