==1081392== Memcheck, a memory error detector ==1081392== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1081392== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1081392== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==1081392== Parent PID: 1072768 ==1081392== ==1081392== ==1081392== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1081392== Open file descriptor 12: ==1081392== at 0x1011822D: pipe (pipe.c:29) ==1081392== by 0x18B2307D: ??? ==1081392== by 0x1408C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1081392== by 0xFA22418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1081392== by 0xF9BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1081392== by 0xE6B2D38: PetscInitialize (pinit.c:924) ==1081392== by 0xE52468F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1081392== by 0xE5246DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1081392== by 0x13AF63: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1081392== by 0x134C11: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1081392== by 0x137336: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1081392== by 0x137232: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1081392== by 0x137845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1081392== by 0x1333D0: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==1081392== ==1081392== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1081392== at 0x1011CBCC: __open_nocancel (open64_nocancel.c:39) ==1081392== by 0x100A0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1081392== by 0xE55C822: ??? ==1081392== by 0xE55C96F: ??? ==1081392== by 0x141316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1081392== by 0x14131938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1081392== by 0x140E7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1081392== by 0x1408C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1081392== by 0xFA22418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1081392== by 0xF9BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1081392== by 0xE6B2D38: PetscInitialize (pinit.c:924) ==1081392== by 0xE52468F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1081392== by 0xE5246DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1081392== by 0x13AF63: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1081392== by 0x134C11: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1081392== by 0x137336: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1081392== by 0x137232: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1081392== by 0x137845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1081392== by 0x1333D0: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==1081392== ==1081392== Open file descriptor 116: ==1081392== ==1081392== ==1081392== Open file descriptor 112: ==1081392== ==1081392== ==1081392== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==1081392== ==1081392== ==1081392== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1081392== ==1081392== ==1081392== ==1081392== HEAP SUMMARY: ==1081392== in use at exit: 700,775 bytes in 9,378 blocks ==1081392== total heap usage: 512,912 allocs, 503,534 frees, 1,665,547,644 bytes allocated ==1081392== ==1081392== LEAK SUMMARY: ==1081392== definitely lost: 0 bytes in 0 blocks ==1081392== indirectly lost: 0 bytes in 0 blocks ==1081392== possibly lost: 0 bytes in 0 blocks ==1081392== still reachable: 56 bytes in 3 blocks ==1081392== suppressed: 700,719 bytes in 9,375 blocks ==1081392== Reachable blocks (those to which a pointer was found) are not shown. ==1081392== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1081392== ==1081392== For lists of detected and suppressed errors, rerun with: -s ==1081392== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)