==1092977== Memcheck, a memory error detector ==1092977== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1092977== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1092977== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulationBoundaryCondition -malloc_debug -malloc_dump -memory_info ==1092977== Parent PID: 1072768 ==1092977== ==1092977== ==1092977== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1092977== Open file descriptor 12: ==1092977== at 0x119E922D: pipe (pipe.c:29) ==1092977== by 0x1A7F707D: ??? ==1092977== by 0x159594CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1092977== by 0x112F3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1092977== by 0x1128CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1092977== by 0xFF83D38: PetscInitialize (pinit.c:924) ==1092977== by 0xFDF568F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1092977== by 0xFDF56DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1092977== by 0x14CE61: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1092977== by 0x14466D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1092977== by 0x14759A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1092977== by 0x147495: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1092977== by 0x147AA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1092977== by 0x142E70: main (TestCryptSimulationBoundaryCondition.cpp:18) ==1092977== ==1092977== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1092977== at 0x119EDBCC: __open_nocancel (open64_nocancel.c:39) ==1092977== by 0x11971C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1092977== by 0xFE2D822: ??? ==1092977== by 0xFE2D96F: ??? ==1092977== by 0x159FE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1092977== by 0x159FE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1092977== by 0x159B4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1092977== by 0x159592DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1092977== by 0x112F3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1092977== by 0x1128CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1092977== by 0xFF83D38: PetscInitialize (pinit.c:924) ==1092977== by 0xFDF568F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1092977== by 0xFDF56DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1092977== by 0x14CE61: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1092977== by 0x14466D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1092977== by 0x14759A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1092977== by 0x147495: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1092977== by 0x147AA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1092977== by 0x142E70: main (TestCryptSimulationBoundaryCondition.cpp:18) ==1092977== ==1092977== Open file descriptor 116: ==1092977== ==1092977== ==1092977== Open file descriptor 112: ==1092977== ==1092977== ==1092977== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulationBoundaryCondition_valgrind.txt ==1092977== ==1092977== ==1092977== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1092977== ==1092977== ==1092977== ==1092977== HEAP SUMMARY: ==1092977== in use at exit: 700,871 bytes in 9,379 blocks ==1092977== total heap usage: 71,367 allocs, 61,988 frees, 1,357,892,843 bytes allocated ==1092977== ==1092977== LEAK SUMMARY: ==1092977== definitely lost: 0 bytes in 0 blocks ==1092977== indirectly lost: 0 bytes in 0 blocks ==1092977== possibly lost: 0 bytes in 0 blocks ==1092977== still reachable: 136 bytes in 4 blocks ==1092977== suppressed: 700,735 bytes in 9,375 blocks ==1092977== Reachable blocks (those to which a pointer was found) are not shown. ==1092977== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1092977== ==1092977== For lists of detected and suppressed errors, rerun with: -s ==1092977== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)