==1093836== Memcheck, a memory error detector ==1093836== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1093836== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1093836== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1093836== Parent PID: 1072768 ==1093836== ==1093836== ==1093836== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1093836== Open file descriptor 12: ==1093836== at 0xA66922D: pipe (pipe.c:29) ==1093836== by 0x1404907D: ??? ==1093836== by 0xD6404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1093836== by 0x9F59418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1093836== by 0x9EF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1093836== by 0xAA04D38: PetscInitialize (pinit.c:924) ==1093836== by 0x9E1B68F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1093836== by 0x9E1B6DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1093836== by 0x12DCC4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1093836== by 0x128B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1093836== by 0x12B9DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1093836== by 0x12B8D7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1093836== by 0x12BEEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1093836== by 0x1273A0: main (TestExtendedBidomainProblem.cpp:18) ==1093836== ==1093836== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1093836== at 0xA66DBCC: __open_nocancel (open64_nocancel.c:39) ==1093836== by 0xA5F1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1093836== by 0x9E53822: ??? ==1093836== by 0x9E5396F: ??? ==1093836== by 0xD6E56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1093836== by 0xD6E5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1093836== by 0xD69B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1093836== by 0xD6402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1093836== by 0x9F59418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1093836== by 0x9EF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1093836== by 0xAA04D38: PetscInitialize (pinit.c:924) ==1093836== by 0x9E1B68F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1093836== by 0x9E1B6DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1093836== by 0x12DCC4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1093836== by 0x128B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1093836== by 0x12B9DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1093836== by 0x12B8D7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1093836== by 0x12BEEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1093836== by 0x1273A0: main (TestExtendedBidomainProblem.cpp:18) ==1093836== ==1093836== Open file descriptor 116: ==1093836== ==1093836== ==1093836== Open file descriptor 112: ==1093836== ==1093836== ==1093836== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==1093836== ==1093836== ==1093836== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1093836== ==1093836== ==1093836== ==1093836== HEAP SUMMARY: ==1093836== in use at exit: 701,168 bytes in 9,383 blocks ==1093836== total heap usage: 2,374,763 allocs, 2,365,380 frees, 2,483,213,233 bytes allocated ==1093836== ==1093836== LEAK SUMMARY: ==1093836== definitely lost: 0 bytes in 0 blocks ==1093836== indirectly lost: 0 bytes in 0 blocks ==1093836== possibly lost: 0 bytes in 0 blocks ==1093836== still reachable: 24 bytes in 2 blocks ==1093836== suppressed: 701,144 bytes in 9,381 blocks ==1093836== Reachable blocks (those to which a pointer was found) are not shown. ==1093836== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1093836== ==1093836== For lists of detected and suppressed errors, rerun with: -s ==1093836== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)