==1074483== Memcheck, a memory error detector ==1074483== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1074483== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1074483== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1074483== Parent PID: 1072768 ==1074483== ==1074483== ==1074483== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1074483== Open file descriptor 12: ==1074483== at 0xED0222D: pipe (pipe.c:29) ==1074483== by 0x18B2307D: ??? ==1074483== by 0x1412A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074483== by 0x108ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074483== by 0x10886D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074483== by 0xF57BD38: PetscInitialize (pinit.c:924) ==1074483== by 0xE5C368F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074483== by 0xE5C36DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074483== by 0x2EC050: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1074483== by 0x2E12B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074483== by 0x2E5C7C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074483== by 0x2E5B1C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074483== by 0x2E61B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074483== by 0x2DF5A0: main (TestNodeBasedCellPopulation.cpp:19) ==1074483== ==1074483== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1074483== at 0xED06BCC: __open_nocancel (open64_nocancel.c:39) ==1074483== by 0xEC8AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1074483== by 0xE5FB822: ??? ==1074483== by 0xE5FB96F: ??? ==1074483== by 0x141CF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074483== by 0x141CF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074483== by 0x14185922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074483== by 0x1412A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074483== by 0x108ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074483== by 0x10886D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074483== by 0xF57BD38: PetscInitialize (pinit.c:924) ==1074483== by 0xE5C368F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074483== by 0xE5C36DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074483== by 0x2EC050: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1074483== by 0x2E12B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074483== by 0x2E5C7C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074483== by 0x2E5B1C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074483== by 0x2E61B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074483== by 0x2DF5A0: main (TestNodeBasedCellPopulation.cpp:19) ==1074483== ==1074483== Open file descriptor 116: ==1074483== ==1074483== ==1074483== Open file descriptor 112: ==1074483== ==1074483== ==1074483== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==1074483== ==1074483== ==1074483== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1074483== ==1074483== ==1074483== ==1074483== HEAP SUMMARY: ==1074483== in use at exit: 700,704 bytes in 9,374 blocks ==1074483== total heap usage: 20,194,117 allocs, 20,184,743 frees, 2,577,873,132 bytes allocated ==1074483== ==1074483== LEAK SUMMARY: ==1074483== definitely lost: 0 bytes in 0 blocks ==1074483== indirectly lost: 0 bytes in 0 blocks ==1074483== possibly lost: 0 bytes in 0 blocks ==1074483== still reachable: 56 bytes in 3 blocks ==1074483== suppressed: 700,648 bytes in 9,371 blocks ==1074483== Reachable blocks (those to which a pointer was found) are not shown. ==1074483== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1074483== ==1074483== For lists of detected and suppressed errors, rerun with: -s ==1074483== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)