==1075069== Memcheck, a memory error detector ==1075069== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1075069== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1075069== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1075069== Parent PID: 1072768 ==1075069== ==1075069== ==1075069== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1075069== Open file descriptor 12: ==1075069== at 0xED4A22D: pipe (pipe.c:29) ==1075069== by 0x18B2307D: ??? ==1075069== by 0x1412A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1075069== by 0x109D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1075069== by 0x1096DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1075069== by 0xF664D38: PetscInitialize (pinit.c:924) ==1075069== by 0xE52468F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1075069== by 0xE5246DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1075069== by 0x21D210: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1075069== by 0x2130F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1075069== by 0x216EAE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1075069== by 0x216D4E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1075069== by 0x2173E5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1075069== by 0x2113E0: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1075069== ==1075069== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1075069== at 0xED4EBCC: __open_nocancel (open64_nocancel.c:39) ==1075069== by 0xECD2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1075069== by 0xE55C822: ??? ==1075069== by 0xE55C96F: ??? ==1075069== by 0x141CF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1075069== by 0x141CF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1075069== by 0x14185922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1075069== by 0x1412A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1075069== by 0x109D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1075069== by 0x1096DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1075069== by 0xF664D38: PetscInitialize (pinit.c:924) ==1075069== by 0xE52468F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1075069== by 0xE5246DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1075069== by 0x21D210: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1075069== by 0x2130F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1075069== by 0x216EAE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1075069== by 0x216D4E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1075069== by 0x2173E5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1075069== by 0x2113E0: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1075069== ==1075069== Open file descriptor 116: ==1075069== ==1075069== ==1075069== Open file descriptor 112: ==1075069== ==1075069== ==1075069== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==1075069== ==1075069== ==1075069== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1075069== ==1075069== ==1075069== ==1075069== HEAP SUMMARY: ==1075069== in use at exit: 700,736 bytes in 9,375 blocks ==1075069== total heap usage: 17,626,094 allocs, 17,616,719 frees, 29,974,946,589 bytes allocated ==1075069== ==1075069== LEAK SUMMARY: ==1075069== definitely lost: 0 bytes in 0 blocks ==1075069== indirectly lost: 0 bytes in 0 blocks ==1075069== possibly lost: 0 bytes in 0 blocks ==1075069== still reachable: 88 bytes in 4 blocks ==1075069== suppressed: 700,648 bytes in 9,371 blocks ==1075069== Reachable blocks (those to which a pointer was found) are not shown. ==1075069== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1075069== ==1075069== For lists of detected and suppressed errors, rerun with: -s ==1075069== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)