==1074539== Memcheck, a memory error detector ==1074539== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1074539== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1074539== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==1074539== Parent PID: 1072768 ==1074539== ==1074539== ==1074539== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1074539== Open file descriptor 12: ==1074539== at 0xE81E22D: pipe (pipe.c:29) ==1074539== by 0x18B2607D: ??? ==1074539== by 0x130744CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074539== by 0xE128418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074539== by 0xE0C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074539== by 0xCDB8D38: PetscInitialize (pinit.c:924) ==1074539== by 0xCC2868F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074539== by 0xCC286DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074539== by 0x13D90B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1074539== by 0x134C5F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074539== by 0x137BB6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074539== by 0x137A56: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074539== by 0x1380ED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074539== by 0x132F90: main (TestPottsUpdateRules.cpp:19) ==1074539== ==1074539== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1074539== at 0xE822BCC: __open_nocancel (open64_nocancel.c:39) ==1074539== by 0xE7A6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1074539== by 0xCC60822: ??? ==1074539== by 0xCC6096F: ??? ==1074539== by 0x131196DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074539== by 0x13119938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074539== by 0x130CF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074539== by 0x130742DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074539== by 0xE128418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074539== by 0xE0C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074539== by 0xCDB8D38: PetscInitialize (pinit.c:924) ==1074539== by 0xCC2868F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074539== by 0xCC286DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074539== by 0x13D90B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1074539== by 0x134C5F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074539== by 0x137BB6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074539== by 0x137A56: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074539== by 0x1380ED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074539== by 0x132F90: main (TestPottsUpdateRules.cpp:19) ==1074539== ==1074539== Open file descriptor 116: ==1074539== ==1074539== ==1074539== Open file descriptor 112: ==1074539== ==1074539== ==1074539== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==1074539== ==1074539== ==1074539== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1074539== ==1074539== ==1074539== ==1074539== HEAP SUMMARY: ==1074539== in use at exit: 700,775 bytes in 9,378 blocks ==1074539== total heap usage: 69,151 allocs, 59,773 frees, 1,354,926,656 bytes allocated ==1074539== ==1074539== LEAK SUMMARY: ==1074539== definitely lost: 0 bytes in 0 blocks ==1074539== indirectly lost: 0 bytes in 0 blocks ==1074539== possibly lost: 0 bytes in 0 blocks ==1074539== still reachable: 56 bytes in 3 blocks ==1074539== suppressed: 700,719 bytes in 9,375 blocks ==1074539== Reachable blocks (those to which a pointer was found) are not shown. ==1074539== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1074539== ==1074539== For lists of detected and suppressed errors, rerun with: -s ==1074539== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)