==1156697== Memcheck, a memory error detector ==1156697== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1156697== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1156697== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==1156697== Parent PID: 1133807 ==1156697== ==1156697== ==1156697== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1156697== Open file descriptor 12: ==1156697== at 0xA45F22D: pipe (pipe.c:29) ==1156697== by 0x1401207D: ??? ==1156697== by 0xF8184CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1156697== by 0xBB68418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1156697== by 0xBB01D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1156697== by 0xA7F8D38: PetscInitialize (pinit.c:924) ==1156697== by 0x9D4868F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1156697== by 0x9D486DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1156697== by 0x12D264: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1156697== by 0x12669D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1156697== by 0x12908A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1156697== by 0x128F85: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1156697== by 0x129599: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1156697== by 0x124EA0: main (TestCheckpointing.cpp:18) ==1156697== ==1156697== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1156697== at 0xA463BCC: __open_nocancel (open64_nocancel.c:39) ==1156697== by 0xA3E7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1156697== by 0x9D80822: ??? ==1156697== by 0x9D8096F: ??? ==1156697== by 0xF8BD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1156697== by 0xF8BD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1156697== by 0xF873922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1156697== by 0xF8182DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1156697== by 0xBB68418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1156697== by 0xBB01D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1156697== by 0xA7F8D38: PetscInitialize (pinit.c:924) ==1156697== by 0x9D4868F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1156697== by 0x9D486DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1156697== by 0x12D264: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1156697== by 0x12669D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1156697== by 0x12908A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1156697== by 0x128F85: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1156697== by 0x129599: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1156697== by 0x124EA0: main (TestCheckpointing.cpp:18) ==1156697== ==1156697== Open file descriptor 116: ==1156697== ==1156697== ==1156697== Open file descriptor 112: ==1156697== ==1156697== ==1156697== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==1156697== ==1156697== ==1156697== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1156697== ==1156697== ==1156697== ==1156697== HEAP SUMMARY: ==1156697== in use at exit: 701,239 bytes in 9,387 blocks ==1156697== total heap usage: 834,179 allocs, 824,792 frees, 1,457,820,857 bytes allocated ==1156697== ==1156697== LEAK SUMMARY: ==1156697== definitely lost: 0 bytes in 0 blocks ==1156697== indirectly lost: 0 bytes in 0 blocks ==1156697== possibly lost: 0 bytes in 0 blocks ==1156697== still reachable: 24 bytes in 2 blocks ==1156697== suppressed: 701,215 bytes in 9,385 blocks ==1156697== Reachable blocks (those to which a pointer was found) are not shown. ==1156697== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1156697== ==1156697== For lists of detected and suppressed errors, rerun with: -s ==1156697== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)