==1143373== Memcheck, a memory error detector ==1143373== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1143373== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1143373== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==1143373== Parent PID: 1133807 ==1143373== ==1143373== ==1143373== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1143373== Open file descriptor 12: ==1143373== at 0x100E422D: pipe (pipe.c:29) ==1143373== by 0x18AEF07D: ??? ==1143373== by 0x140544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1143373== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1143373== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1143373== by 0xE67ED38: PetscInitialize (pinit.c:924) ==1143373== by 0xE4F068F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1143373== by 0xE4F06DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1143373== by 0x1543A7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1143373== by 0x14D633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1143373== by 0x150502: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1143373== by 0x1503A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1143373== by 0x150A39: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1143373== by 0x14B920: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==1143373== ==1143373== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1143373== at 0x100E8BCC: __open_nocancel (open64_nocancel.c:39) ==1143373== by 0x1006CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1143373== by 0xE528822: ??? ==1143373== by 0xE52896F: ??? ==1143373== by 0x140F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1143373== by 0x140F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1143373== by 0x140AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1143373== by 0x140542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1143373== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1143373== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1143373== by 0xE67ED38: PetscInitialize (pinit.c:924) ==1143373== by 0xE4F068F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1143373== by 0xE4F06DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1143373== by 0x1543A7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1143373== by 0x14D633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1143373== by 0x150502: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1143373== by 0x1503A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1143373== by 0x150A39: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1143373== by 0x14B920: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==1143373== ==1143373== Open file descriptor 116: ==1143373== ==1143373== ==1143373== Open file descriptor 112: ==1143373== ==1143373== ==1143373== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==1143373== ==1143373== ==1143373== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1143373== ==1143373== ==1143373== ==1143373== HEAP SUMMARY: ==1143373== in use at exit: 700,704 bytes in 9,374 blocks ==1143373== total heap usage: 4,263,675 allocs, 4,254,301 frees, 1,913,140,588 bytes allocated ==1143373== ==1143373== LEAK SUMMARY: ==1143373== definitely lost: 0 bytes in 0 blocks ==1143373== indirectly lost: 0 bytes in 0 blocks ==1143373== possibly lost: 0 bytes in 0 blocks ==1143373== still reachable: 56 bytes in 3 blocks ==1143373== suppressed: 700,648 bytes in 9,371 blocks ==1143373== Reachable blocks (those to which a pointer was found) are not shown. ==1143373== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1143373== ==1143373== For lists of detected and suppressed errors, rerun with: -s ==1143373== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)