==1154095== Memcheck, a memory error detector ==1154095== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1154095== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1154095== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1154095== Parent PID: 1133807 ==1154095== ==1154095== ==1154095== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1154095== Open file descriptor 12: ==1154095== at 0x105E722D: pipe (pipe.c:29) ==1154095== by 0x1A7C307D: ??? ==1154095== by 0x159D24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1154095== by 0x12271418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1154095== by 0x1220AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1154095== by 0x10F01D38: PetscInitialize (pinit.c:924) ==1154095== by 0xFDC168F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1154095== by 0xFDC16DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1154095== by 0x24501C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1154095== by 0x239B33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1154095== by 0x23E3D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1154095== by 0x23E270: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1154095== by 0x23E907: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1154095== by 0x237E20: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1154095== ==1154095== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1154095== at 0x105EBBCC: __open_nocancel (open64_nocancel.c:39) ==1154095== by 0x1056FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1154095== by 0xFDF9822: ??? ==1154095== by 0xFDF996F: ??? ==1154095== by 0x15A776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1154095== by 0x15A77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1154095== by 0x15A2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1154095== by 0x159D22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1154095== by 0x12271418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1154095== by 0x1220AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1154095== by 0x10F01D38: PetscInitialize (pinit.c:924) ==1154095== by 0xFDC168F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1154095== by 0xFDC16DD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1154095== by 0x24501C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1154095== by 0x239B33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1154095== by 0x23E3D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1154095== by 0x23E270: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1154095== by 0x23E907: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1154095== by 0x237E20: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1154095== ==1154095== Open file descriptor 116: ==1154095== ==1154095== ==1154095== Open file descriptor 112: ==1154095== ==1154095== ==1154095== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==1154095== ==1154095== ==1154095== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1154095== ==1154095== ==1154095== ==1154095== HEAP SUMMARY: ==1154095== in use at exit: 700,720 bytes in 9,374 blocks ==1154095== total heap usage: 6,298,756 allocs, 6,289,382 frees, 2,068,134,866 bytes allocated ==1154095== ==1154095== LEAK SUMMARY: ==1154095== definitely lost: 0 bytes in 0 blocks ==1154095== indirectly lost: 0 bytes in 0 blocks ==1154095== possibly lost: 0 bytes in 0 blocks ==1154095== still reachable: 56 bytes in 3 blocks ==1154095== suppressed: 700,664 bytes in 9,371 blocks ==1154095== Reachable blocks (those to which a pointer was found) are not shown. ==1154095== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1154095== ==1154095== For lists of detected and suppressed errors, rerun with: -s ==1154095== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)