==1241703== Memcheck, a memory error detector ==1241703== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1241703== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1241703== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestArchiveCell -malloc_debug -malloc_dump -memory_info ==1241703== Parent PID: 1240504 ==1241703== ==1241703== ==1241703== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1241703== Open file descriptor 12: ==1241703== at 0xEF3022D: pipe (pipe.c:29) ==1241703== by 0x1996D07D: ??? ==1241703== by 0x13EBE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1241703== by 0xEB81418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241703== by 0xEB1AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241703== by 0xD811D38: PetscInitialize (pinit.c:924) ==1241703== by 0xD681717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1241703== by 0xD681765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1241703== by 0x1B14CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1241703== by 0x1AA2A1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1241703== by 0x1AD318: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1241703== by 0x1AD214: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1241703== by 0x1AD827: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1241703== by 0x1A8A60: main (TestArchiveCell.cpp:18) ==1241703== ==1241703== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1241703== at 0xEF34BCC: __open_nocancel (open64_nocancel.c:39) ==1241703== by 0xEEB8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1241703== by 0xD6B9822: ??? ==1241703== by 0xD6B996F: ??? ==1241703== by 0x13F636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241703== by 0x13F63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241703== by 0x13F19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241703== by 0x13EBE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1241703== by 0xEB81418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241703== by 0xEB1AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241703== by 0xD811D38: PetscInitialize (pinit.c:924) ==1241703== by 0xD681717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1241703== by 0xD681765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1241703== by 0x1B14CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1241703== by 0x1AA2A1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1241703== by 0x1AD318: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1241703== by 0x1AD214: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1241703== by 0x1AD827: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1241703== by 0x1A8A60: main (TestArchiveCell.cpp:18) ==1241703== ==1241703== Open file descriptor 116: ==1241703== ==1241703== ==1241703== Open file descriptor 112: ==1241703== ==1241703== ==1241703== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestArchiveCell_valgrind.txt ==1241703== ==1241703== ==1241703== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1241703== ==1241703== ==1241703== ==1241703== HEAP SUMMARY: ==1241703== in use at exit: 707,111 bytes in 9,491 blocks ==1241703== total heap usage: 56,236 allocs, 46,745 frees, 1,354,024,197 bytes allocated ==1241703== ==1241703== 448 bytes in 8 blocks are definitely lost in loss record 53 of 81 ==1241703== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1241703== by 0x1057D8A5: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1241703== by 0x1057BB3E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1241703== by 0x1057EAE4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1241703== by 0x1057EB09: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1241703== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1241703== by 0x4006567: call_init (dl-init.c:33) ==1241703== by 0x4006567: _dl_init (dl-init.c:117) ==1241703== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1241703== by 0x3: ??? ==1241703== by 0x1FFF000326: ??? ==1241703== by 0x1FFF00038E: ??? ==1241703== by 0x1FFF00039C: ??? ==1241703== by 0x1FFF0003A9: ??? ==1241703== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1241703== LEAK SUMMARY: ==1241703== definitely lost: 448 bytes in 8 blocks ==1241703== indirectly lost: 0 bytes in 0 blocks ==1241703== possibly lost: 0 bytes in 0 blocks ==1241703== still reachable: 5,944 bytes in 108 blocks ==1241703== suppressed: 700,719 bytes in 9,375 blocks ==1241703== Reachable blocks (those to which a pointer was found) are not shown. ==1241703== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1241703== ==1241703== For lists of detected and suppressed errors, rerun with: -s ==1241703== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 37 from 37)