==1263475== Memcheck, a memory error detector ==1263475== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1263475== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1263475== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==1263475== Parent PID: 1240504 ==1263475== ==1263475== ==1263475== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1263475== Open file descriptor 12: ==1263475== at 0x897C22D: pipe (pipe.c:29) ==1263475== by 0x1446507D: ??? ==1263475== by 0xEFA84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1263475== by 0xA08F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1263475== by 0xA028D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1263475== by 0x8D1FD38: PetscInitialize (pinit.c:924) ==1263475== by 0x8267717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1263475== by 0x8267765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1263475== by 0x12AA12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1263475== by 0x123ACF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1263475== by 0x127372: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1263475== by 0x127212: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1263475== by 0x1278A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1263475== by 0x121E00: main (TestCardiacSimulation.cpp:19) ==1263475== ==1263475== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1263475== at 0x8980BCC: __open_nocancel (open64_nocancel.c:39) ==1263475== by 0x8904C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1263475== by 0x829F822: ??? ==1263475== by 0x829F96F: ??? ==1263475== by 0xF04D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1263475== by 0xF04D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1263475== by 0xF003922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1263475== by 0xEFA82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1263475== by 0xA08F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1263475== by 0xA028D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1263475== by 0x8D1FD38: PetscInitialize (pinit.c:924) ==1263475== by 0x8267717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1263475== by 0x8267765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1263475== by 0x12AA12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1263475== by 0x123ACF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1263475== by 0x127372: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1263475== by 0x127212: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1263475== by 0x1278A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1263475== by 0x121E00: main (TestCardiacSimulation.cpp:19) ==1263475== ==1263475== Open file descriptor 116: ==1263475== ==1263475== ==1263475== Open file descriptor 112: ==1263475== ==1263475== ==1263475== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==1263475== ==1263475== ==1263475== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1263475== ==1263475== ==1263475== ==1263475== HEAP SUMMARY: ==1263475== in use at exit: 714,860 bytes in 9,511 blocks ==1263475== total heap usage: 4,724,432 allocs, 4,714,921 frees, 2,839,657,790 bytes allocated ==1263475== ==1263475== 448 bytes in 8 blocks are definitely lost in loss record 63 of 95 ==1263475== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1263475== by 0xBAA58A5: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1263475== by 0xBAA3B3E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1263475== by 0xBAA6AE4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1263475== by 0xBAA6B09: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1263475== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1263475== by 0x4006567: call_init (dl-init.c:33) ==1263475== by 0x4006567: _dl_init (dl-init.c:117) ==1263475== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1263475== by 0x3: ??? ==1263475== by 0x1FFF000322: ??? ==1263475== by 0x1FFF00038B: ??? ==1263475== by 0x1FFF000399: ??? ==1263475== by 0x1FFF0003A6: ??? ==1263475== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1263475== LEAK SUMMARY: ==1263475== definitely lost: 448 bytes in 8 blocks ==1263475== indirectly lost: 0 bytes in 0 blocks ==1263475== possibly lost: 0 bytes in 0 blocks ==1263475== still reachable: 13,268 bytes in 122 blocks ==1263475== suppressed: 701,144 bytes in 9,381 blocks ==1263475== Reachable blocks (those to which a pointer was found) are not shown. ==1263475== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1263475== ==1263475== For lists of detected and suppressed errors, rerun with: -s ==1263475== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 231 from 34)