==1241735== Memcheck, a memory error detector ==1241735== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1241735== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1241735== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellDataMaps -malloc_debug -malloc_dump -memory_info ==1241735== Parent PID: 1240504 ==1241735== ==1241735== ==1241735== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1241735== Open file descriptor 12: ==1241735== at 0xEF8D22D: pipe (pipe.c:29) ==1241735== by 0x1996D07D: ??? ==1241735== by 0x13EBE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1241735== by 0xEBDE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241735== by 0xEB77D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241735== by 0xD84ED38: PetscInitialize (pinit.c:924) ==1241735== by 0xD722717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1241735== by 0xD722765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1241735== by 0x125E6F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1241735== by 0x11FAEF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1241735== by 0x122560: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1241735== by 0x122400: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1241735== by 0x122A97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1241735== by 0x11DE20: main (TestCellDataMaps.cpp:19) ==1241735== ==1241735== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1241735== at 0xEF91BCC: __open_nocancel (open64_nocancel.c:39) ==1241735== by 0xEF15C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1241735== by 0xEAD8822: ??? ==1241735== by 0xEAD896F: ??? ==1241735== by 0x13F636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241735== by 0x13F63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241735== by 0x13F19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241735== by 0x13EBE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1241735== by 0xEBDE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241735== by 0xEB77D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241735== by 0xD84ED38: PetscInitialize (pinit.c:924) ==1241735== by 0xD722717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1241735== by 0xD722765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1241735== by 0x125E6F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1241735== by 0x11FAEF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1241735== by 0x122560: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1241735== by 0x122400: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1241735== by 0x122A97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1241735== by 0x11DE20: main (TestCellDataMaps.cpp:19) ==1241735== ==1241735== Open file descriptor 116: ==1241735== ==1241735== ==1241735== Open file descriptor 112: ==1241735== ==1241735== ==1241735== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellDataMaps_valgrind.txt ==1241735== ==1241735== ==1241735== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1241735== ==1241735== ==1241735== ==1241735== HEAP SUMMARY: ==1241735== in use at exit: 707,175 bytes in 9,491 blocks ==1241735== total heap usage: 55,946 allocs, 46,455 frees, 1,353,994,957 bytes allocated ==1241735== ==1241735== 448 bytes in 8 blocks are definitely lost in loss record 53 of 81 ==1241735== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1241735== by 0x105DA8A5: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1241735== by 0x105D8B3E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1241735== by 0x105DBAE4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1241735== by 0x105DBB09: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1241735== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1241735== by 0x4006567: call_init (dl-init.c:33) ==1241735== by 0x4006567: _dl_init (dl-init.c:117) ==1241735== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1241735== by 0x3: ??? ==1241735== by 0x1FFF000322: ??? ==1241735== by 0x1FFF00038B: ??? ==1241735== by 0x1FFF000399: ??? ==1241735== by 0x1FFF0003A6: ??? ==1241735== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1241735== LEAK SUMMARY: ==1241735== definitely lost: 448 bytes in 8 blocks ==1241735== indirectly lost: 0 bytes in 0 blocks ==1241735== possibly lost: 0 bytes in 0 blocks ==1241735== still reachable: 6,008 bytes in 108 blocks ==1241735== suppressed: 700,719 bytes in 9,375 blocks ==1241735== Reachable blocks (those to which a pointer was found) are not shown. ==1241735== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1241735== ==1241735== For lists of detected and suppressed errors, rerun with: -s ==1241735== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 37 from 37)