==1241071== Memcheck, a memory error detector ==1241071== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1241071== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1241071== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestDistanceMapCalculator -malloc_debug -malloc_dump -memory_info ==1241071== Parent PID: 1240504 ==1241071== ==1241071== ==1241071== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1241071== Open file descriptor 12: ==1241071== at 0x6DCA22D: pipe (pipe.c:29) ==1241071== by 0x1018607D: ??? ==1241071== by 0xBB0C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1241071== by 0x8425418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241071== by 0x83BED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241071== by 0x70B5D38: PetscInitialize (pinit.c:924) ==1241071== by 0x65E6717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1241071== by 0x65E6765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1241071== by 0x12ABAE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1241071== by 0x124AEF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1241071== by 0x1273B0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1241071== by 0x127251: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1241071== by 0x1278E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1241071== by 0x122E20: main (TestDistanceMapCalculator.cpp:19) ==1241071== ==1241071== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1241071== at 0x6DCEBCC: __open_nocancel (open64_nocancel.c:39) ==1241071== by 0x6D52C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1241071== by 0x661E822: ??? ==1241071== by 0x661E96F: ??? ==1241071== by 0xBBB16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241071== by 0xBBB1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241071== by 0xBB67922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1241071== by 0xBB0C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1241071== by 0x8425418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241071== by 0x83BED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1241071== by 0x70B5D38: PetscInitialize (pinit.c:924) ==1241071== by 0x65E6717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1241071== by 0x65E6765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1241071== by 0x12ABAE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1241071== by 0x124AEF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1241071== by 0x1273B0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1241071== by 0x127251: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1241071== by 0x1278E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1241071== by 0x122E20: main (TestDistanceMapCalculator.cpp:19) ==1241071== ==1241071== Open file descriptor 116: ==1241071== ==1241071== ==1241071== Open file descriptor 112: ==1241071== ==1241071== ==1241071== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDistanceMapCalculator_valgrind.txt ==1241071== ==1241071== ==1241071== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1241071== ==1241071== ==1241071== ==1241071== HEAP SUMMARY: ==1241071== in use at exit: 709,400 bytes in 9,486 blocks ==1241071== total heap usage: 7,654,056 allocs, 7,644,570 frees, 1,619,373,228 bytes allocated ==1241071== ==1241071== 448 bytes in 8 blocks are definitely lost in loss record 47 of 73 ==1241071== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1241071== by 0x57978A5: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1241071== by 0x5795B3E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1241071== by 0x5798AE4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1241071== by 0x5798B09: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1241071== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1241071== by 0x4006567: call_init (dl-init.c:33) ==1241071== by 0x4006567: _dl_init (dl-init.c:117) ==1241071== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1241071== by 0x3: ??? ==1241071== by 0x1FFF00031E: ??? ==1241071== by 0x1FFF00038A: ??? ==1241071== by 0x1FFF000398: ??? ==1241071== by 0x1FFF0003A5: ??? ==1241071== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1241071== LEAK SUMMARY: ==1241071== definitely lost: 448 bytes in 8 blocks ==1241071== indirectly lost: 0 bytes in 0 blocks ==1241071== possibly lost: 0 bytes in 0 blocks ==1241071== still reachable: 8,400 bytes in 107 blocks ==1241071== suppressed: 700,552 bytes in 9,371 blocks ==1241071== Reachable blocks (those to which a pointer was found) are not shown. ==1241071== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1241071== ==1241071== For lists of detected and suppressed errors, rerun with: -s ==1241071== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 30 from 30)