==1240918== Memcheck, a memory error detector ==1240918== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1240918== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1240918== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestNodesOnlyMesh -malloc_debug -malloc_dump -memory_info ==1240918== Parent PID: 1240504 ==1240918== ==1240918== ==1240918== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1240918== Open file descriptor 12: ==1240918== at 0x6E0C22D: pipe (pipe.c:29) ==1240918== by 0x1018607D: ??? ==1240918== by 0xBB0C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1240918== by 0x8425418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1240918== by 0x83BED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1240918== by 0x70B5D38: PetscInitialize (pinit.c:924) ==1240918== by 0x65E6717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1240918== by 0x65E6765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1240918== by 0x14E82E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1240918== by 0x14791F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1240918== by 0x14AC1E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1240918== by 0x14AABE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1240918== by 0x14B155: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1240918== by 0x145C50: main (TestNodesOnlyMesh.cpp:19) ==1240918== ==1240918== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1240918== at 0x6E10BCC: __open_nocancel (open64_nocancel.c:39) ==1240918== by 0x6D94C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1240918== by 0x661E822: ??? ==1240918== by 0x661E96F: ??? ==1240918== by 0xBBB16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1240918== by 0xBBB1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1240918== by 0xBB67922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1240918== by 0xBB0C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1240918== by 0x8425418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1240918== by 0x83BED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1240918== by 0x70B5D38: PetscInitialize (pinit.c:924) ==1240918== by 0x65E6717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1240918== by 0x65E6765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1240918== by 0x14E82E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1240918== by 0x14791F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1240918== by 0x14AC1E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1240918== by 0x14AABE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1240918== by 0x14B155: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1240918== by 0x145C50: main (TestNodesOnlyMesh.cpp:19) ==1240918== ==1240918== Open file descriptor 116: ==1240918== ==1240918== ==1240918== Open file descriptor 112: ==1240918== ==1240918== ==1240918== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodesOnlyMesh_valgrind.txt ==1240918== ==1240918== ==1240918== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1240918== ==1240918== ==1240918== ==1240918== HEAP SUMMARY: ==1240918== in use at exit: 706,919 bytes in 9,489 blocks ==1240918== total heap usage: 361,598 allocs, 352,109 frees, 1,373,335,482 bytes allocated ==1240918== ==1240918== 448 bytes in 8 blocks are definitely lost in loss record 51 of 76 ==1240918== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1240918== by 0x57978A5: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1240918== by 0x5795B3E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1240918== by 0x5798AE4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1240918== by 0x5798B09: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1240918== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1240918== by 0x4006567: call_init (dl-init.c:33) ==1240918== by 0x4006567: _dl_init (dl-init.c:117) ==1240918== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1240918== by 0x3: ??? ==1240918== by 0x1FFF00032E: ??? ==1240918== by 0x1FFF000392: ??? ==1240918== by 0x1FFF0003A0: ??? ==1240918== by 0x1FFF0003AD: ??? ==1240918== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1240918== LEAK SUMMARY: ==1240918== definitely lost: 448 bytes in 8 blocks ==1240918== indirectly lost: 0 bytes in 0 blocks ==1240918== possibly lost: 0 bytes in 0 blocks ==1240918== still reachable: 5,848 bytes in 106 blocks ==1240918== suppressed: 700,623 bytes in 9,375 blocks ==1240918== Reachable blocks (those to which a pointer was found) are not shown. ==1240918== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1240918== ==1240918== For lists of detected and suppressed errors, rerun with: -s ==1240918== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 34 from 34)