==1260711== Memcheck, a memory error detector ==1260711== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1260711== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1260711== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntConcentration -malloc_debug -malloc_dump -memory_info ==1260711== Parent PID: 1240504 ==1260711== ==1260711== ==1260711== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1260711== Open file descriptor 12: ==1260711== at 0x1291822D: pipe (pipe.c:29) ==1260711== by 0x1B65107D: ??? ==1260711== by 0x167B34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1260711== by 0x1213B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1260711== by 0x120D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1260711== by 0x10DCBD38: PetscInitialize (pinit.c:924) ==1260711== by 0x10C3D717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1260711== by 0x10C3D765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1260711== by 0x14F239: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1260711== by 0x1485C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1260711== by 0x14B574: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1260711== by 0x14B414: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1260711== by 0x14BAAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1260711== by 0x1468B0: main (TestWntConcentration.cpp:19) ==1260711== ==1260711== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1260711== at 0x1291CBCC: __open_nocancel (open64_nocancel.c:39) ==1260711== by 0x128A0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1260711== by 0x10C75822: ??? ==1260711== by 0x10C7596F: ??? ==1260711== by 0x168586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1260711== by 0x16858938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1260711== by 0x1680E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1260711== by 0x167B32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1260711== by 0x1213B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1260711== by 0x120D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1260711== by 0x10DCBD38: PetscInitialize (pinit.c:924) ==1260711== by 0x10C3D717: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1260711== by 0x10C3D765: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1260711== by 0x14F239: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1260711== by 0x1485C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1260711== by 0x14B574: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1260711== by 0x14B414: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1260711== by 0x14BAAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1260711== by 0x1468B0: main (TestWntConcentration.cpp:19) ==1260711== ==1260711== Open file descriptor 116: ==1260711== ==1260711== ==1260711== Open file descriptor 112: ==1260711== ==1260711== ==1260711== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntConcentration_valgrind.txt ==1260711== ==1260711== ==1260711== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1260711== ==1260711== ==1260711== ==1260711== HEAP SUMMARY: ==1260711== in use at exit: 707,143 bytes in 9,491 blocks ==1260711== total heap usage: 58,914 allocs, 49,423 frees, 1,355,187,103 bytes allocated ==1260711== ==1260711== 448 bytes in 8 blocks are definitely lost in loss record 53 of 81 ==1260711== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1260711== by 0xFDEE8A5: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1260711== by 0xFDECB3E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1260711== by 0xFDEFAE4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1260711== by 0xFDEFB09: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1260711== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1260711== by 0x4006567: call_init (dl-init.c:33) ==1260711== by 0x4006567: _dl_init (dl-init.c:117) ==1260711== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1260711== by 0x3: ??? ==1260711== by 0x1FFF000326: ??? ==1260711== by 0x1FFF00038E: ??? ==1260711== by 0x1FFF00039C: ??? ==1260711== by 0x1FFF0003A9: ??? ==1260711== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1260711== LEAK SUMMARY: ==1260711== definitely lost: 448 bytes in 8 blocks ==1260711== indirectly lost: 0 bytes in 0 blocks ==1260711== possibly lost: 0 bytes in 0 blocks ==1260711== still reachable: 5,960 bytes in 108 blocks ==1260711== suppressed: 700,735 bytes in 9,375 blocks ==1260711== Reachable blocks (those to which a pointer was found) are not shown. ==1260711== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1260711== ==1260711== For lists of detected and suppressed errors, rerun with: -s ==1260711== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 37 from 37)