==1284797== Memcheck, a memory error detector ==1284797== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1284797== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1284797== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1284797== Parent PID: 1283189 ==1284797== ==1284797== ==1284797== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1284797== Open file descriptor 12: ==1284797== at 0xD3CC22D: pipe (pipe.c:29) ==1284797== by 0x18BE907D: ??? ==1284797== by 0x141EA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1284797== by 0x109B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1284797== by 0x10949D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1284797== by 0xF640D38: PetscInitialize (pinit.c:924) ==1284797== by 0xCC8D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1284797== by 0xCC8D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1284797== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1284797== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1284797== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1284797== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1284797== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1284797== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==1284797== ==1284797== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1284797== at 0xD3D0BCC: __open_nocancel (open64_nocancel.c:39) ==1284797== by 0xD354C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1284797== by 0xCCC5822: ??? ==1284797== by 0xCCC596F: ??? ==1284797== by 0x1428F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1284797== by 0x1428F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1284797== by 0x14245922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1284797== by 0x141EA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1284797== by 0x109B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1284797== by 0x10949D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1284797== by 0xF640D38: PetscInitialize (pinit.c:924) ==1284797== by 0xCC8D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1284797== by 0xCC8D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1284797== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1284797== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1284797== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1284797== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1284797== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1284797== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==1284797== ==1284797== Open file descriptor 116: ==1284797== ==1284797== ==1284797== Open file descriptor 112: ==1284797== ==1284797== ==1284797== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1284797== ==1284797== ==1284797== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1284797== ==1284797== ==1284797== ==1284797== HEAP SUMMARY: ==1284797== in use at exit: 700,775 bytes in 9,378 blocks ==1284797== total heap usage: 57,444 allocs, 48,066 frees, 1,354,155,416 bytes allocated ==1284797== ==1284797== LEAK SUMMARY: ==1284797== definitely lost: 0 bytes in 0 blocks ==1284797== indirectly lost: 0 bytes in 0 blocks ==1284797== possibly lost: 0 bytes in 0 blocks ==1284797== still reachable: 56 bytes in 3 blocks ==1284797== suppressed: 700,719 bytes in 9,375 blocks ==1284797== Reachable blocks (those to which a pointer was found) are not shown. ==1284797== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1284797== ==1284797== For lists of detected and suppressed errors, rerun with: -s ==1284797== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)