==1303520== Memcheck, a memory error detector ==1303520== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1303520== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1303520== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1303520== Parent PID: 1283189 ==1303520== ==1303520== ==1303520== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1303520== Open file descriptor 12: ==1303520== at 0x11AAA22D: pipe (pipe.c:29) ==1303520== by 0x1A8C907D: ??? ==1303520== by 0x15A334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1303520== by 0x113B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1303520== by 0x1134DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1303520== by 0x10044D38: PetscInitialize (pinit.c:924) ==1303520== by 0xFEB658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1303520== by 0xFEB65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1303520== by 0x232E45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1303520== by 0x229013: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1303520== by 0x22CCD6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1303520== by 0x22CB76: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1303520== by 0x22D20D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1303520== by 0x227300: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1303520== ==1303520== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1303520== at 0x11AAEBCC: __open_nocancel (open64_nocancel.c:39) ==1303520== by 0x11A32C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1303520== by 0xFEEE822: ??? ==1303520== by 0xFEEE96F: ??? ==1303520== by 0x15AD86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1303520== by 0x15AD8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1303520== by 0x15A8E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1303520== by 0x15A332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1303520== by 0x113B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1303520== by 0x1134DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1303520== by 0x10044D38: PetscInitialize (pinit.c:924) ==1303520== by 0xFEB658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1303520== by 0xFEB65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1303520== by 0x232E45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1303520== by 0x229013: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1303520== by 0x22CCD6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1303520== by 0x22CB76: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1303520== by 0x22D20D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1303520== by 0x227300: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1303520== ==1303520== Open file descriptor 116: ==1303520== ==1303520== ==1303520== Open file descriptor 112: ==1303520== ==1303520== ==1303520== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==1303520== ==1303520== ==1303520== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1303520== ==1303520== ==1303520== ==1303520== HEAP SUMMARY: ==1303520== in use at exit: 700,720 bytes in 9,374 blocks ==1303520== total heap usage: 3,709,490 allocs, 3,700,116 frees, 1,633,517,586 bytes allocated ==1303520== ==1303520== LEAK SUMMARY: ==1303520== definitely lost: 0 bytes in 0 blocks ==1303520== indirectly lost: 0 bytes in 0 blocks ==1303520== possibly lost: 0 bytes in 0 blocks ==1303520== still reachable: 56 bytes in 3 blocks ==1303520== suppressed: 700,664 bytes in 9,371 blocks ==1303520== Reachable blocks (those to which a pointer was found) are not shown. ==1303520== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1303520== ==1303520== For lists of detected and suppressed errors, rerun with: -s ==1303520== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)