==1284909== Memcheck, a memory error detector ==1284909== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1284909== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1284909== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1284909== Parent PID: 1283189 ==1284909== ==1284909== ==1284909== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1284909== Open file descriptor 12: ==1284909== at 0xEDB322D: pipe (pipe.c:29) ==1284909== by 0x18BE707D: ??? ==1284909== by 0x141EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1284909== by 0x109B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1284909== by 0x10949D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1284909== by 0xF63ED38: PetscInitialize (pinit.c:924) ==1284909== by 0xE67458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1284909== by 0xE6745D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1284909== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1284909== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1284909== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1284909== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1284909== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1284909== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==1284909== ==1284909== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1284909== at 0xEDB7BCC: __open_nocancel (open64_nocancel.c:39) ==1284909== by 0xED3BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1284909== by 0xE6AC822: ??? ==1284909== by 0xE6AC96F: ??? ==1284909== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1284909== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1284909== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1284909== by 0x141EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1284909== by 0x109B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1284909== by 0x10949D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1284909== by 0xF63ED38: PetscInitialize (pinit.c:924) ==1284909== by 0xE67458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1284909== by 0xE6745D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1284909== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1284909== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1284909== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1284909== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1284909== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1284909== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==1284909== ==1284909== Open file descriptor 116: ==1284909== ==1284909== ==1284909== Open file descriptor 112: ==1284909== ==1284909== ==1284909== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==1284909== ==1284909== ==1284909== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1284909== ==1284909== ==1284909== ==1284909== HEAP SUMMARY: ==1284909== in use at exit: 700,704 bytes in 9,374 blocks ==1284909== total heap usage: 20,194,117 allocs, 20,184,743 frees, 2,577,873,028 bytes allocated ==1284909== ==1284909== LEAK SUMMARY: ==1284909== definitely lost: 0 bytes in 0 blocks ==1284909== indirectly lost: 0 bytes in 0 blocks ==1284909== possibly lost: 0 bytes in 0 blocks ==1284909== still reachable: 56 bytes in 3 blocks ==1284909== suppressed: 700,648 bytes in 9,371 blocks ==1284909== Reachable blocks (those to which a pointer was found) are not shown. ==1284909== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1284909== ==1284909== For lists of detected and suppressed errors, rerun with: -s ==1284909== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)