==1327294== Memcheck, a memory error detector ==1327294== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1327294== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1327294== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestAlarcon2004OxygenBasedCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1327294== Parent PID: 1325736 ==1327294== ==1327294== ==1327294== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1327294== Open file descriptor 12: ==1327294== at 0xE78A22D: pipe (pipe.c:29) ==1327294== by 0x18BE707D: ??? ==1327294== by 0x131884CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1327294== by 0xE3D9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1327294== by 0xE372D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1327294== by 0xD069D38: PetscInitialize (pinit.c:924) ==1327294== by 0xCEDB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1327294== by 0xCEDB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1327294== by 0x122005: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1327294== by 0x11D563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1327294== by 0x11FB0E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1327294== by 0x11FA0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1327294== by 0x12001D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1327294== by 0x11BD65: main (TestAlarcon2004OxygenBasedCellCycleOdeSystem.cpp:18) ==1327294== ==1327294== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1327294== at 0xE78EBCC: __open_nocancel (open64_nocancel.c:39) ==1327294== by 0xE712C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1327294== by 0xCF13822: ??? ==1327294== by 0xCF1396F: ??? ==1327294== by 0x1322D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1327294== by 0x1322D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1327294== by 0x131E3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1327294== by 0x131882DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1327294== by 0xE3D9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1327294== by 0xE372D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1327294== by 0xD069D38: PetscInitialize (pinit.c:924) ==1327294== by 0xCEDB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1327294== by 0xCEDB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1327294== by 0x122005: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1327294== by 0x11D563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1327294== by 0x11FB0E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1327294== by 0x11FA0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1327294== by 0x12001D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1327294== by 0x11BD65: main (TestAlarcon2004OxygenBasedCellCycleOdeSystem.cpp:18) ==1327294== ==1327294== Open file descriptor 116: ==1327294== ==1327294== ==1327294== Open file descriptor 112: ==1327294== ==1327294== ==1327294== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAlarcon2004OxygenBasedCellCycleOdeSystem_valgrind.txt ==1327294== ==1327294== ==1327294== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1327294== ==1327294== ==1327294== ==1327294== HEAP SUMMARY: ==1327294== in use at exit: 700,743 bytes in 9,377 blocks ==1327294== total heap usage: 167,821 allocs, 158,444 frees, 1,364,605,749 bytes allocated ==1327294== ==1327294== LEAK SUMMARY: ==1327294== definitely lost: 0 bytes in 0 blocks ==1327294== indirectly lost: 0 bytes in 0 blocks ==1327294== possibly lost: 0 bytes in 0 blocks ==1327294== still reachable: 24 bytes in 2 blocks ==1327294== suppressed: 700,719 bytes in 9,375 blocks ==1327294== Reachable blocks (those to which a pointer was found) are not shown. ==1327294== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1327294== ==1327294== For lists of detected and suppressed errors, rerun with: -s ==1327294== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)