==1346018== Memcheck, a memory error detector ==1346018== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1346018== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1346018== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1346018== Parent PID: 1325736 ==1346018== ==1346018== ==1346018== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1346018== Open file descriptor 12: ==1346018== at 0x106DC22D: pipe (pipe.c:29) ==1346018== by 0x1A8CB07D: ??? ==1346018== by 0x15AD14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1346018== by 0x12378418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1346018== by 0x12311D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1346018== by 0x11008D38: PetscInitialize (pinit.c:924) ==1346018== by 0xFEB658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1346018== by 0xFEB65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1346018== by 0x24AE20: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1346018== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1346018== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1346018== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1346018== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1346018== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1346018== ==1346018== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1346018== at 0x106E0BCC: __open_nocancel (open64_nocancel.c:39) ==1346018== by 0x10664C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1346018== by 0xFEEE822: ??? ==1346018== by 0xFEEE96F: ??? ==1346018== by 0x15B766DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1346018== by 0x15B76938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1346018== by 0x15B2C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1346018== by 0x15AD12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1346018== by 0x12378418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1346018== by 0x12311D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1346018== by 0x11008D38: PetscInitialize (pinit.c:924) ==1346018== by 0xFEB658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1346018== by 0xFEB65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1346018== by 0x24AE20: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1346018== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1346018== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1346018== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1346018== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1346018== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1346018== ==1346018== Open file descriptor 116: ==1346018== ==1346018== ==1346018== Open file descriptor 112: ==1346018== ==1346018== ==1346018== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==1346018== ==1346018== ==1346018== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1346018== ==1346018== ==1346018== ==1346018== HEAP SUMMARY: ==1346018== in use at exit: 700,720 bytes in 9,374 blocks ==1346018== total heap usage: 6,298,752 allocs, 6,289,378 frees, 2,068,134,413 bytes allocated ==1346018== ==1346018== LEAK SUMMARY: ==1346018== definitely lost: 0 bytes in 0 blocks ==1346018== indirectly lost: 0 bytes in 0 blocks ==1346018== possibly lost: 0 bytes in 0 blocks ==1346018== still reachable: 56 bytes in 3 blocks ==1346018== suppressed: 700,664 bytes in 9,371 blocks ==1346018== Reachable blocks (those to which a pointer was found) are not shown. ==1346018== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1346018== ==1346018== For lists of detected and suppressed errors, rerun with: -s ==1346018== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)