==1346796== Memcheck, a memory error detector ==1346796== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1346796== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1346796== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1346796== Parent PID: 1325736 ==1346796== ==1346796== ==1346796== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1346796== Open file descriptor 12: ==1346796== at 0xA6E522D: pipe (pipe.c:29) ==1346796== by 0x140CE07D: ??? ==1346796== by 0xD6D34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1346796== by 0x9FD5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1346796== by 0x9F6ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1346796== by 0xAA88D38: PetscInitialize (pinit.c:924) ==1346796== by 0x9E9758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1346796== by 0x9E975D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1346796== by 0x12DB00: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1346796== by 0x128A3D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1346796== by 0x12B846: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1346796== by 0x12B741: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1346796== by 0x12BD55: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1346796== by 0x127240: main (TestExtendedBidomainProblem.cpp:18) ==1346796== ==1346796== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1346796== at 0xA6E9BCC: __open_nocancel (open64_nocancel.c:39) ==1346796== by 0xA66DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1346796== by 0x9ECF822: ??? ==1346796== by 0x9ECF96F: ??? ==1346796== by 0xD7786DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1346796== by 0xD778938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1346796== by 0xD72E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1346796== by 0xD6D32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1346796== by 0x9FD5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1346796== by 0x9F6ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1346796== by 0xAA88D38: PetscInitialize (pinit.c:924) ==1346796== by 0x9E9758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1346796== by 0x9E975D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1346796== by 0x12DB00: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1346796== by 0x128A3D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1346796== by 0x12B846: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1346796== by 0x12B741: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1346796== by 0x12BD55: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1346796== by 0x127240: main (TestExtendedBidomainProblem.cpp:18) ==1346796== ==1346796== Open file descriptor 116: ==1346796== ==1346796== ==1346796== Open file descriptor 112: ==1346796== ==1346796== ==1346796== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==1346796== ==1346796== ==1346796== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1346796== ==1346796== ==1346796== ==1346796== HEAP SUMMARY: ==1346796== in use at exit: 701,168 bytes in 9,383 blocks ==1346796== total heap usage: 2,374,764 allocs, 2,365,381 frees, 2,483,213,507 bytes allocated ==1346796== ==1346796== LEAK SUMMARY: ==1346796== definitely lost: 0 bytes in 0 blocks ==1346796== indirectly lost: 0 bytes in 0 blocks ==1346796== possibly lost: 0 bytes in 0 blocks ==1346796== still reachable: 24 bytes in 2 blocks ==1346796== suppressed: 701,144 bytes in 9,381 blocks ==1346796== Reachable blocks (those to which a pointer was found) are not shown. ==1346796== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1346796== ==1346796== For lists of detected and suppressed errors, rerun with: -s ==1346796== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)