==1347509== Memcheck, a memory error detector ==1347509== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1347509== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1347509== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==1347509== Parent PID: 1325736 ==1347509== ==1347509== ==1347509== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1347509== Open file descriptor 12: ==1347509== at 0x85AF22D: pipe (pipe.c:29) ==1347509== by 0x140D107D: ??? ==1347509== by 0xEBC74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1347509== by 0x9CC2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1347509== by 0x9C5BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1347509== by 0x8952D38: PetscInitialize (pinit.c:924) ==1347509== by 0x81DD58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1347509== by 0x81DD5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1347509== by 0x11518A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1347509== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1347509== by 0x112FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1347509== by 0x112ECD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1347509== by 0x1134E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1347509== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==1347509== ==1347509== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1347509== at 0x85B3BCC: __open_nocancel (open64_nocancel.c:39) ==1347509== by 0x8537C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1347509== by 0x8215822: ??? ==1347509== by 0x821596F: ??? ==1347509== by 0xEC6C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1347509== by 0xEC6C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1347509== by 0xEC22922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1347509== by 0xEBC72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1347509== by 0x9CC2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1347509== by 0x9C5BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1347509== by 0x8952D38: PetscInitialize (pinit.c:924) ==1347509== by 0x81DD58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1347509== by 0x81DD5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1347509== by 0x11518A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1347509== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1347509== by 0x112FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1347509== by 0x112ECD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1347509== by 0x1134E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1347509== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==1347509== ==1347509== Open file descriptor 116: ==1347509== ==1347509== ==1347509== Open file descriptor 112: ==1347509== ==1347509== ==1347509== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==1347509== ==1347509== ==1347509== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1347509== ==1347509== ==1347509== ==1347509== HEAP SUMMARY: ==1347509== in use at exit: 700,759 bytes in 9,377 blocks ==1347509== total heap usage: 51,067 allocs, 41,690 frees, 1,353,534,107 bytes allocated ==1347509== ==1347509== LEAK SUMMARY: ==1347509== definitely lost: 0 bytes in 0 blocks ==1347509== indirectly lost: 0 bytes in 0 blocks ==1347509== possibly lost: 0 bytes in 0 blocks ==1347509== still reachable: 24 bytes in 2 blocks ==1347509== suppressed: 700,735 bytes in 9,375 blocks ==1347509== Reachable blocks (those to which a pointer was found) are not shown. ==1347509== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1347509== ==1347509== For lists of detected and suppressed errors, rerun with: -s ==1347509== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)