==1328464== Memcheck, a memory error detector ==1328464== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1328464== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1328464== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1328464== Parent PID: 1325736 ==1328464== ==1328464== ==1328464== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1328464== Open file descriptor 12: ==1328464== at 0xF27722D: pipe (pipe.c:29) ==1328464== by 0x18BE807D: ??? ==1328464== by 0x1430D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1328464== by 0x10F13418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1328464== by 0x10EACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1328464== by 0xFBA3D38: PetscInitialize (pinit.c:924) ==1328464== by 0xE5D558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1328464== by 0xE5D55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1328464== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1328464== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1328464== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1328464== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1328464== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1328464== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1328464== ==1328464== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1328464== at 0xF27BBCC: __open_nocancel (open64_nocancel.c:39) ==1328464== by 0xF1FFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1328464== by 0xE60D822: ??? ==1328464== by 0xE60D96F: ??? ==1328464== by 0x143B26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1328464== by 0x143B2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1328464== by 0x14368922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1328464== by 0x1430D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1328464== by 0x10F13418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1328464== by 0x10EACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1328464== by 0xFBA3D38: PetscInitialize (pinit.c:924) ==1328464== by 0xE5D558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1328464== by 0xE5D55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1328464== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1328464== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1328464== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1328464== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1328464== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1328464== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1328464== ==1328464== Open file descriptor 116: ==1328464== ==1328464== ==1328464== Open file descriptor 112: ==1328464== ==1328464== ==1328464== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==1328464== ==1328464== ==1328464== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1328464== ==1328464== ==1328464== ==1328464== HEAP SUMMARY: ==1328464== in use at exit: 700,704 bytes in 9,374 blocks ==1328464== total heap usage: 6,914,966 allocs, 6,905,592 frees, 8,038,849,175 bytes allocated ==1328464== ==1328464== LEAK SUMMARY: ==1328464== definitely lost: 0 bytes in 0 blocks ==1328464== indirectly lost: 0 bytes in 0 blocks ==1328464== possibly lost: 0 bytes in 0 blocks ==1328464== still reachable: 56 bytes in 3 blocks ==1328464== suppressed: 700,648 bytes in 9,371 blocks ==1328464== Reachable blocks (those to which a pointer was found) are not shown. ==1328464== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1328464== ==1328464== For lists of detected and suppressed errors, rerun with: -s ==1328464== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)