==1343580== Memcheck, a memory error detector ==1343580== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1343580== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1343580== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1343580== Parent PID: 1325736 ==1343580== ==1343580== ==1343580== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1343580== Open file descriptor 12: ==1343580== at 0xD38A22D: pipe (pipe.c:29) ==1343580== by 0x18BE907D: ??? ==1343580== by 0x141EA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1343580== by 0x109B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1343580== by 0x10949D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1343580== by 0xF640D38: PetscInitialize (pinit.c:924) ==1343580== by 0xCC8D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1343580== by 0xCC8D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1343580== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1343580== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1343580== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1343580== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1343580== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1343580== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1343580== ==1343580== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1343580== at 0xD38EBCC: __open_nocancel (open64_nocancel.c:39) ==1343580== by 0xD312C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1343580== by 0xCCC5822: ??? ==1343580== by 0xCCC596F: ??? ==1343580== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1343580== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1343580== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1343580== by 0x141EA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1343580== by 0x109B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1343580== by 0x10949D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1343580== by 0xF640D38: PetscInitialize (pinit.c:924) ==1343580== by 0xCC8D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1343580== by 0xCC8D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1343580== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1343580== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1343580== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1343580== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1343580== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1343580== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1343580== ==1343580== Open file descriptor 116: ==1343580== ==1343580== ==1343580== Open file descriptor 112: ==1343580== ==1343580== ==1343580== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==1343580== ==1343580== ==1343580== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1343580== ==1343580== ==1343580== ==1343580== HEAP SUMMARY: ==1343580== in use at exit: 700,704 bytes in 9,374 blocks ==1343580== total heap usage: 40,686,617 allocs, 40,677,243 frees, 3,844,615,630 bytes allocated ==1343580== ==1343580== LEAK SUMMARY: ==1343580== definitely lost: 0 bytes in 0 blocks ==1343580== indirectly lost: 0 bytes in 0 blocks ==1343580== possibly lost: 0 bytes in 0 blocks ==1343580== still reachable: 56 bytes in 3 blocks ==1343580== suppressed: 700,648 bytes in 9,371 blocks ==1343580== Reachable blocks (those to which a pointer was found) are not shown. ==1343580== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1343580== ==1343580== For lists of detected and suppressed errors, rerun with: -s ==1343580== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)