==1407866== Memcheck, a memory error detector ==1407866== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1407866== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1407866== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==1407866== Parent PID: 1386893 ==1407866== ==1407866== ==1407866== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1407866== Open file descriptor 12: ==1407866== at 0xB89222D: pipe (pipe.c:29) ==1407866== by 0x1401207D: ??? ==1407866== by 0xF7CB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1407866== by 0xB182418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1407866== by 0xB11BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1407866== by 0x9DF2D38: PetscInitialize (pinit.c:924) ==1407866== by 0x9CC669F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1407866== by 0x9CC66ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1407866== by 0x13425E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1407866== by 0x12D91D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1407866== by 0x1300AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1407866== by 0x12FFA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1407866== by 0x1305BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1407866== by 0x12C120: main (TestBidomainDistributedMesh.cpp:18) ==1407866== ==1407866== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1407866== at 0xB896BCC: __open_nocancel (open64_nocancel.c:39) ==1407866== by 0xB81AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1407866== by 0xB07C822: ??? ==1407866== by 0xB07C96F: ??? ==1407866== by 0xF8706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1407866== by 0xF870938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1407866== by 0xF826922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1407866== by 0xF7CB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1407866== by 0xB182418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1407866== by 0xB11BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1407866== by 0x9DF2D38: PetscInitialize (pinit.c:924) ==1407866== by 0x9CC669F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1407866== by 0x9CC66ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1407866== by 0x13425E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1407866== by 0x12D91D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1407866== by 0x1300AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1407866== by 0x12FFA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1407866== by 0x1305BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1407866== by 0x12C120: main (TestBidomainDistributedMesh.cpp:18) ==1407866== ==1407866== Open file descriptor 116: ==1407866== ==1407866== ==1407866== Open file descriptor 112: ==1407866== ==1407866== ==1407866== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==1407866== ==1407866== ==1407866== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1407866== ==1407866== ==1407866== ==1407866== HEAP SUMMARY: ==1407866== in use at exit: 701,239 bytes in 9,387 blocks ==1407866== total heap usage: 430,057 allocs, 420,670 frees, 1,452,285,197 bytes allocated ==1407866== ==1407866== LEAK SUMMARY: ==1407866== definitely lost: 0 bytes in 0 blocks ==1407866== indirectly lost: 0 bytes in 0 blocks ==1407866== possibly lost: 0 bytes in 0 blocks ==1407866== still reachable: 24 bytes in 2 blocks ==1407866== suppressed: 701,215 bytes in 9,385 blocks ==1407866== Reachable blocks (those to which a pointer was found) are not shown. ==1407866== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1407866== ==1407866== For lists of detected and suppressed errors, rerun with: -s ==1407866== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 55 from 38)