==1388420== Memcheck, a memory error detector ==1388420== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1388420== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1388420== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsMeshReader -malloc_debug -malloc_dump -memory_info ==1388420== Parent PID: 1386893 ==1388420== ==1388420== ==1388420== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1388420== Open file descriptor 12: ==1388420== at 0xE8A622D: pipe (pipe.c:29) ==1388420== by 0x18AF107D: ??? ==1388420== by 0x140A54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1388420== by 0x10574418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1388420== by 0x1050DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1388420== by 0xF202D38: PetscInitialize (pinit.c:924) ==1388420== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1388420== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1388420== by 0x11A076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1388420== by 0x115625: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1388420== by 0x1180F8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1388420== by 0x117F98: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1388420== by 0x11862F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1388420== by 0x113955: main (TestPottsMeshReader.cpp:19) ==1388420== ==1388420== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1388420== at 0xE8AABCC: __open_nocancel (open64_nocancel.c:39) ==1388420== by 0xE82EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1388420== by 0xE528822: ??? ==1388420== by 0xE52896F: ??? ==1388420== by 0x1414A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1388420== by 0x1414A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1388420== by 0x14100922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1388420== by 0x140A52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1388420== by 0x10574418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1388420== by 0x1050DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1388420== by 0xF202D38: PetscInitialize (pinit.c:924) ==1388420== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1388420== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1388420== by 0x11A076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1388420== by 0x115625: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1388420== by 0x1180F8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1388420== by 0x117F98: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1388420== by 0x11862F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1388420== by 0x113955: main (TestPottsMeshReader.cpp:19) ==1388420== ==1388420== Open file descriptor 116: ==1388420== ==1388420== ==1388420== Open file descriptor 112: ==1388420== ==1388420== ==1388420== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsMeshReader_valgrind.txt ==1388420== ==1388420== ==1388420== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1388420== ==1388420== ==1388420== ==1388420== HEAP SUMMARY: ==1388420== in use at exit: 700,743 bytes in 9,377 blocks ==1388420== total heap usage: 55,072 allocs, 45,695 frees, 1,354,120,237 bytes allocated ==1388420== ==1388420== LEAK SUMMARY: ==1388420== definitely lost: 0 bytes in 0 blocks ==1388420== indirectly lost: 0 bytes in 0 blocks ==1388420== possibly lost: 0 bytes in 0 blocks ==1388420== still reachable: 24 bytes in 2 blocks ==1388420== suppressed: 700,719 bytes in 9,375 blocks ==1388420== Reachable blocks (those to which a pointer was found) are not shown. ==1388420== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1388420== ==1388420== For lists of detected and suppressed errors, rerun with: -s ==1388420== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)