==1388664== Memcheck, a memory error detector ==1388664== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1388664== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1388664== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==1388664== Parent PID: 1386893 ==1388664== ==1388664== ==1388664== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1388664== Open file descriptor 12: ==1388664== at 0xE81E22D: pipe (pipe.c:29) ==1388664== by 0x18AF107D: ??? ==1388664== by 0x130404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1388664== by 0xE128418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1388664== by 0xE0C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1388664== by 0xCDB8D38: PetscInitialize (pinit.c:924) ==1388664== by 0xCC2869F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1388664== by 0xCC286ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1388664== by 0x13D90B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1388664== by 0x134C5F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1388664== by 0x137BB6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1388664== by 0x137A56: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1388664== by 0x1380ED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1388664== by 0x132F90: main (TestPottsUpdateRules.cpp:19) ==1388664== ==1388664== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1388664== at 0xE822BCC: __open_nocancel (open64_nocancel.c:39) ==1388664== by 0xE7A6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1388664== by 0xCC60822: ??? ==1388664== by 0xCC6096F: ??? ==1388664== by 0x130E56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1388664== by 0x130E5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1388664== by 0x1309B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1388664== by 0x130402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1388664== by 0xE128418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1388664== by 0xE0C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1388664== by 0xCDB8D38: PetscInitialize (pinit.c:924) ==1388664== by 0xCC2869F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1388664== by 0xCC286ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1388664== by 0x13D90B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1388664== by 0x134C5F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1388664== by 0x137BB6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1388664== by 0x137A56: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1388664== by 0x1380ED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1388664== by 0x132F90: main (TestPottsUpdateRules.cpp:19) ==1388664== ==1388664== Open file descriptor 116: ==1388664== ==1388664== ==1388664== Open file descriptor 112: ==1388664== ==1388664== ==1388664== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==1388664== ==1388664== ==1388664== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1388664== ==1388664== ==1388664== ==1388664== HEAP SUMMARY: ==1388664== in use at exit: 700,775 bytes in 9,378 blocks ==1388664== total heap usage: 69,146 allocs, 59,768 frees, 1,354,917,563 bytes allocated ==1388664== ==1388664== LEAK SUMMARY: ==1388664== definitely lost: 0 bytes in 0 blocks ==1388664== indirectly lost: 0 bytes in 0 blocks ==1388664== possibly lost: 0 bytes in 0 blocks ==1388664== still reachable: 56 bytes in 3 blocks ==1388664== suppressed: 700,719 bytes in 9,375 blocks ==1388664== Reachable blocks (those to which a pointer was found) are not shown. ==1388664== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1388664== ==1388664== For lists of detected and suppressed errors, rerun with: -s ==1388664== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)