==1510749== Memcheck, a memory error detector ==1510749== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1510749== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1510749== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1510749== Parent PID: 1509143 ==1510749== ==1510749== ==1510749== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1510749== Open file descriptor 12: ==1510749== at 0xD36722D: pipe (pipe.c:29) ==1510749== by 0x18AF107D: ??? ==1510749== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1510749== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1510749== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1510749== by 0xF549D38: PetscInitialize (pinit.c:924) ==1510749== by 0xCC2869F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1510749== by 0xCC286ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1510749== by 0x13D48A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1510749== by 0x13502D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1510749== by 0x137D58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1510749== by 0x137C53: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1510749== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1510749== by 0x133830: main (TestCaUpdateRules.cpp:18) ==1510749== ==1510749== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1510749== at 0xD36BBCC: __open_nocancel (open64_nocancel.c:39) ==1510749== by 0xD2EFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1510749== by 0xCC60822: ??? ==1510749== by 0xCC6096F: ??? ==1510749== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1510749== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1510749== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1510749== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1510749== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1510749== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1510749== by 0xF549D38: PetscInitialize (pinit.c:924) ==1510749== by 0xCC2869F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1510749== by 0xCC286ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1510749== by 0x13D48A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1510749== by 0x13502D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1510749== by 0x137D58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1510749== by 0x137C53: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1510749== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1510749== by 0x133830: main (TestCaUpdateRules.cpp:18) ==1510749== ==1510749== Open file descriptor 116: ==1510749== ==1510749== ==1510749== Open file descriptor 112: ==1510749== ==1510749== ==1510749== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1510749== ==1510749== ==1510749== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1510749== ==1510749== ==1510749== ==1510749== HEAP SUMMARY: ==1510749== in use at exit: 700,775 bytes in 9,378 blocks ==1510749== total heap usage: 57,433 allocs, 48,055 frees, 1,354,137,457 bytes allocated ==1510749== ==1510749== LEAK SUMMARY: ==1510749== definitely lost: 0 bytes in 0 blocks ==1510749== indirectly lost: 0 bytes in 0 blocks ==1510749== possibly lost: 0 bytes in 0 blocks ==1510749== still reachable: 56 bytes in 3 blocks ==1510749== suppressed: 700,719 bytes in 9,375 blocks ==1510749== Reachable blocks (those to which a pointer was found) are not shown. ==1510749== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1510749== ==1510749== For lists of detected and suppressed errors, rerun with: -s ==1510749== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)