==1529434== Memcheck, a memory error detector ==1529434== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1529434== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1529434== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation1d -malloc_debug -malloc_dump -memory_info ==1529434== Parent PID: 1509143 ==1529434== ==1529434== ==1529434== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1529434== Open file descriptor 12: ==1529434== at 0x119B522D: pipe (pipe.c:29) ==1529434== by 0x1A7C307D: ??? ==1529434== by 0x159254CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1529434== by 0x112BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1529434== by 0x11258D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1529434== by 0xFF4FD38: PetscInitialize (pinit.c:924) ==1529434== by 0xFDC169F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1529434== by 0xFDC16ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1529434== by 0x22ED35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1529434== by 0x224D41: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1529434== by 0x22898A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1529434== by 0x228885: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1529434== by 0x228E99: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1529434== by 0x223500: main (TestCryptSimulation1d.cpp:18) ==1529434== ==1529434== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1529434== at 0x119B9BCC: __open_nocancel (open64_nocancel.c:39) ==1529434== by 0x1193DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1529434== by 0xFDF9822: ??? ==1529434== by 0xFDF996F: ??? ==1529434== by 0x159CA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1529434== by 0x159CA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1529434== by 0x15980922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1529434== by 0x159252DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1529434== by 0x112BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1529434== by 0x11258D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1529434== by 0xFF4FD38: PetscInitialize (pinit.c:924) ==1529434== by 0xFDC169F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1529434== by 0xFDC16ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1529434== by 0x22ED35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1529434== by 0x224D41: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1529434== by 0x22898A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1529434== by 0x228885: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1529434== by 0x228E99: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1529434== by 0x223500: main (TestCryptSimulation1d.cpp:18) ==1529434== ==1529434== Open file descriptor 116: ==1529434== ==1529434== ==1529434== Open file descriptor 112: ==1529434== ==1529434== ==1529434== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation1d_valgrind.txt ==1529434== ==1529434== ==1529434== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1529434== ==1529434== ==1529434== ==1529434== HEAP SUMMARY: ==1529434== in use at exit: 700,720 bytes in 9,374 blocks ==1529434== total heap usage: 4,061,105 allocs, 4,051,731 frees, 1,967,814,178 bytes allocated ==1529434== ==1529434== LEAK SUMMARY: ==1529434== definitely lost: 0 bytes in 0 blocks ==1529434== indirectly lost: 0 bytes in 0 blocks ==1529434== possibly lost: 0 bytes in 0 blocks ==1529434== still reachable: 56 bytes in 3 blocks ==1529434== suppressed: 700,664 bytes in 9,371 blocks ==1529434== Reachable blocks (those to which a pointer was found) are not shown. ==1529434== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1529434== ==1529434== For lists of detected and suppressed errors, rerun with: -s ==1529434== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)