==1510859== Memcheck, a memory error detector ==1510859== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1510859== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1510859== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1510859== Parent PID: 1509143 ==1510859== ==1510859== ==1510859== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1510859== Open file descriptor 12: ==1510859== at 0xECCE22D: pipe (pipe.c:29) ==1510859== by 0x18AF107D: ??? ==1510859== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1510859== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1510859== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1510859== by 0xF547D38: PetscInitialize (pinit.c:924) ==1510859== by 0xE58F69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1510859== by 0xE58F6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1510859== by 0x2EC050: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1510859== by 0x2E12B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1510859== by 0x2E5C7C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1510859== by 0x2E5B1C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1510859== by 0x2E61B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1510859== by 0x2DF5A0: main (TestNodeBasedCellPopulation.cpp:19) ==1510859== ==1510859== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1510859== at 0xECD2BCC: __open_nocancel (open64_nocancel.c:39) ==1510859== by 0xEC56C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1510859== by 0xE5C7822: ??? ==1510859== by 0xE5C796F: ??? ==1510859== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1510859== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1510859== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1510859== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1510859== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1510859== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1510859== by 0xF547D38: PetscInitialize (pinit.c:924) ==1510859== by 0xE58F69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1510859== by 0xE58F6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1510859== by 0x2EC050: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1510859== by 0x2E12B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1510859== by 0x2E5C7C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1510859== by 0x2E5B1C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1510859== by 0x2E61B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1510859== by 0x2DF5A0: main (TestNodeBasedCellPopulation.cpp:19) ==1510859== ==1510859== Open file descriptor 116: ==1510859== ==1510859== ==1510859== Open file descriptor 112: ==1510859== ==1510859== ==1510859== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==1510859== ==1510859== ==1510859== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1510859== ==1510859== ==1510859== ==1510859== HEAP SUMMARY: ==1510859== in use at exit: 700,704 bytes in 9,374 blocks ==1510859== total heap usage: 20,194,117 allocs, 20,184,743 frees, 2,577,872,900 bytes allocated ==1510859== ==1510859== LEAK SUMMARY: ==1510859== definitely lost: 0 bytes in 0 blocks ==1510859== indirectly lost: 0 bytes in 0 blocks ==1510859== possibly lost: 0 bytes in 0 blocks ==1510859== still reachable: 56 bytes in 3 blocks ==1510859== suppressed: 700,648 bytes in 9,371 blocks ==1510859== Reachable blocks (those to which a pointer was found) are not shown. ==1510859== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1510859== ==1510859== For lists of detected and suppressed errors, rerun with: -s ==1510859== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)