==85649== Memcheck, a memory error detector ==85649== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==85649== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==85649== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==85649== Parent PID: 61810 ==85649== ==85649== ==85649== FILE DESCRIPTORS: 9 open (3 std) at exit. ==85649== Open file descriptor 12: ==85649== at 0xA54622D: pipe (pipe.c:29) ==85649== by 0x1401207D: ??? ==85649== by 0xF8164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==85649== by 0xBC4F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==85649== by 0xBBE8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==85649== by 0xA8DFD38: PetscInitialize (pinit.c:924) ==85649== by 0x9E2F69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==85649== by 0x9E2F6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==85649== by 0x12EF7A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==85649== by 0x126DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==85649== by 0x1299FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==85649== by 0x12989C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==85649== by 0x129F33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==85649== by 0x125100: main (TestHdf5ToVisualizerConverters.cpp:19) ==85649== ==85649== Open file descriptor 8: /dev/shm/open_mpi.0000 ==85649== at 0xA54ABCC: __open_nocancel (open64_nocancel.c:39) ==85649== by 0xA4CEC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==85649== by 0x9E67822: ??? ==85649== by 0x9E6796F: ??? ==85649== by 0xF8BB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==85649== by 0xF8BB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==85649== by 0xF871922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==85649== by 0xF8162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==85649== by 0xBC4F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==85649== by 0xBBE8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==85649== by 0xA8DFD38: PetscInitialize (pinit.c:924) ==85649== by 0x9E2F69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==85649== by 0x9E2F6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==85649== by 0x12EF7A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==85649== by 0x126DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==85649== by 0x1299FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==85649== by 0x12989C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==85649== by 0x129F33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==85649== by 0x125100: main (TestHdf5ToVisualizerConverters.cpp:19) ==85649== ==85649== Open file descriptor 112: ==85649== ==85649== ==85649== Open file descriptor 109: ==85649== ==85649== ==85649== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==85649== ==85649== ==85649== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==85649== ==85649== ==85649== ==85649== HEAP SUMMARY: ==85649== in use at exit: 700,749 bytes in 9,377 blocks ==85649== total heap usage: 122,354 allocs, 112,977 frees, 1,381,303,702 bytes allocated ==85649== ==85649== LEAK SUMMARY: ==85649== definitely lost: 0 bytes in 0 blocks ==85649== indirectly lost: 0 bytes in 0 blocks ==85649== possibly lost: 0 bytes in 0 blocks ==85649== still reachable: 24 bytes in 2 blocks ==85649== suppressed: 700,725 bytes in 9,375 blocks ==85649== Reachable blocks (those to which a pointer was found) are not shown. ==85649== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==85649== ==85649== For lists of detected and suppressed errors, rerun with: -s ==85649== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)