==64625== Memcheck, a memory error detector ==64625== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==64625== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==64625== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==64625== Parent PID: 61810 ==64625== ==64625== ==64625== FILE DESCRIPTORS: 9 open (3 std) at exit. ==64625== Open file descriptor 12: ==64625== at 0xEC2D22D: pipe (pipe.c:29) ==64625== by 0x18AF107D: ??? ==64625== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==64625== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64625== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64625== by 0xF547D38: PetscInitialize (pinit.c:924) ==64625== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==64625== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==64625== by 0x2D5D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==64625== by 0x2CBBE1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==64625== by 0x2D0166: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==64625== by 0x2D0061: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==64625== by 0x2D0675: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==64625== by 0x2CA3A0: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==64625== ==64625== Open file descriptor 8: /dev/shm/open_mpi.0000 ==64625== at 0xEC31BCC: __open_nocancel (open64_nocancel.c:39) ==64625== by 0xEBB5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==64625== by 0xE528822: ??? ==64625== by 0xE52896F: ??? ==64625== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64625== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64625== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64625== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==64625== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64625== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64625== by 0xF547D38: PetscInitialize (pinit.c:924) ==64625== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==64625== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==64625== by 0x2D5D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==64625== by 0x2CBBE1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==64625== by 0x2D0166: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==64625== by 0x2D0061: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==64625== by 0x2D0675: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==64625== by 0x2CA3A0: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==64625== ==64625== Open file descriptor 112: ==64625== ==64625== ==64625== Open file descriptor 109: ==64625== ==64625== ==64625== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==64625== ==64625== ==64625== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==64625== ==64625== ==64625== ==64625== HEAP SUMMARY: ==64625== in use at exit: 700,765 bytes in 9,378 blocks ==64625== total heap usage: 58,722 allocs, 49,344 frees, 1,355,227,868 bytes allocated ==64625== ==64625== LEAK SUMMARY: ==64625== definitely lost: 0 bytes in 0 blocks ==64625== indirectly lost: 0 bytes in 0 blocks ==64625== possibly lost: 0 bytes in 0 blocks ==64625== still reachable: 56 bytes in 3 blocks ==64625== suppressed: 700,709 bytes in 9,375 blocks ==64625== Reachable blocks (those to which a pointer was found) are not shown. ==64625== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==64625== ==64625== For lists of detected and suppressed errors, rerun with: -s ==64625== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)