==81393== Memcheck, a memory error detector ==81393== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==81393== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==81393== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==81393== Parent PID: 61810 ==81393== ==81393== ==81393== FILE DESCRIPTORS: 9 open (3 std) at exit. ==81393== Open file descriptor 12: ==81393== at 0x1018922D: pipe (pipe.c:29) ==81393== by 0x18AEF07D: ??? ==81393== by 0x140544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==81393== by 0xF9AC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==81393== by 0xF945D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==81393== by 0xE61CD38: PetscInitialize (pinit.c:924) ==81393== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==81393== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==81393== by 0x13334F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==81393== by 0x12CDCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==81393== by 0x12F620: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==81393== by 0x12F4C1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==81393== by 0x12FB57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==81393== by 0x12B100: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==81393== ==81393== Open file descriptor 8: /dev/shm/open_mpi.0000 ==81393== at 0x1018DBCC: __open_nocancel (open64_nocancel.c:39) ==81393== by 0x10111C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==81393== by 0xF8A6822: ??? ==81393== by 0xF8A696F: ??? ==81393== by 0x140F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==81393== by 0x140F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==81393== by 0x140AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==81393== by 0x140542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==81393== by 0xF9AC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==81393== by 0xF945D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==81393== by 0xE61CD38: PetscInitialize (pinit.c:924) ==81393== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==81393== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==81393== by 0x13334F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==81393== by 0x12CDCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==81393== by 0x12F620: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==81393== by 0x12F4C1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==81393== by 0x12FB57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==81393== by 0x12B100: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==81393== ==81393== Open file descriptor 112: ==81393== ==81393== ==81393== Open file descriptor 109: ==81393== ==81393== ==81393== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==81393== ==81393== ==81393== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==81393== ==81393== ==81393== ==81393== HEAP SUMMARY: ==81393== in use at exit: 700,765 bytes in 9,378 blocks ==81393== total heap usage: 1,399,208 allocs, 1,389,830 frees, 1,413,245,724 bytes allocated ==81393== ==81393== LEAK SUMMARY: ==81393== definitely lost: 0 bytes in 0 blocks ==81393== indirectly lost: 0 bytes in 0 blocks ==81393== possibly lost: 0 bytes in 0 blocks ==81393== still reachable: 56 bytes in 3 blocks ==81393== suppressed: 700,709 bytes in 9,375 blocks ==81393== Reachable blocks (those to which a pointer was found) are not shown. ==81393== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==81393== ==81393== For lists of detected and suppressed errors, rerun with: -s ==81393== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)