==64444== Memcheck, a memory error detector ==64444== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==64444== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==64444== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==64444== Parent PID: 61810 ==64444== ==64444== ==64444== FILE DESCRIPTORS: 9 open (3 std) at exit. ==64444== Open file descriptor 12: ==64444== at 0xD2E722D: pipe (pipe.c:29) ==64444== by 0x18AEF07D: ??? ==64444== by 0x140A94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==64444== by 0x10572418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64444== by 0x1050BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64444== by 0xF202D38: PetscInitialize (pinit.c:924) ==64444== by 0xCEEF69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==64444== by 0xCEEF6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==64444== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==64444== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==64444== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==64444== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==64444== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==64444== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==64444== ==64444== Open file descriptor 8: /dev/shm/open_mpi.0000 ==64444== at 0xD2EBBCC: __open_nocancel (open64_nocancel.c:39) ==64444== by 0xD26FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==64444== by 0xCF27822: ??? ==64444== by 0xCF2796F: ??? ==64444== by 0x1414E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64444== by 0x1414E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64444== by 0x14104922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64444== by 0x140A92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==64444== by 0x10572418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64444== by 0x1050BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64444== by 0xF202D38: PetscInitialize (pinit.c:924) ==64444== by 0xCEEF69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==64444== by 0xCEEF6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==64444== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==64444== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==64444== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==64444== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==64444== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==64444== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==64444== ==64444== Open file descriptor 112: ==64444== ==64444== ==64444== Open file descriptor 109: ==64444== ==64444== ==64444== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==64444== ==64444== ==64444== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==64444== ==64444== ==64444== ==64444== HEAP SUMMARY: ==64444== in use at exit: 700,733 bytes in 9,377 blocks ==64444== total heap usage: 60,168 allocs, 50,791 frees, 1,354,331,151 bytes allocated ==64444== ==64444== LEAK SUMMARY: ==64444== definitely lost: 0 bytes in 0 blocks ==64444== indirectly lost: 0 bytes in 0 blocks ==64444== possibly lost: 0 bytes in 0 blocks ==64444== still reachable: 24 bytes in 2 blocks ==64444== suppressed: 700,709 bytes in 9,375 blocks ==64444== Reachable blocks (those to which a pointer was found) are not shown. ==64444== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==64444== ==64444== For lists of detected and suppressed errors, rerun with: -s ==64444== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)