==83139== Memcheck, a memory error detector ==83139== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==83139== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==83139== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==83139== Parent PID: 61810 ==83139== ==83139== ==83139== FILE DESCRIPTORS: 9 open (3 std) at exit. ==83139== Open file descriptor 12: ==83139== at 0x1197322D: pipe (pipe.c:29) ==83139== by 0x1A7C307D: ??? ==83139== by 0x159254CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==83139== by 0x1127D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==83139== by 0x11216D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==83139== by 0xFEEDD38: PetscInitialize (pinit.c:924) ==83139== by 0xFDC169F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==83139== by 0xFDC16ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==83139== by 0x1284E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==83139== by 0x12255D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==83139== by 0x124B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==83139== by 0x124A64: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==83139== by 0x125077: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==83139== by 0x120D60: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==83139== ==83139== Open file descriptor 8: /dev/shm/open_mpi.0000 ==83139== at 0x11977BCC: __open_nocancel (open64_nocancel.c:39) ==83139== by 0x118FBC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==83139== by 0x11177822: ??? ==83139== by 0x1117796F: ??? ==83139== by 0x159CA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==83139== by 0x159CA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==83139== by 0x15980922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==83139== by 0x159252DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==83139== by 0x1127D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==83139== by 0x11216D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==83139== by 0xFEEDD38: PetscInitialize (pinit.c:924) ==83139== by 0xFDC169F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==83139== by 0xFDC16ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==83139== by 0x1284E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==83139== by 0x12255D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==83139== by 0x124B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==83139== by 0x124A64: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==83139== by 0x125077: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==83139== by 0x120D60: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==83139== ==83139== Open file descriptor 112: ==83139== ==83139== ==83139== Open file descriptor 109: ==83139== ==83139== ==83139== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==83139== ==83139== ==83139== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==83139== ==83139== ==83139== ==83139== HEAP SUMMARY: ==83139== in use at exit: 700,861 bytes in 9,379 blocks ==83139== total heap usage: 55,679 allocs, 46,300 frees, 1,353,994,892 bytes allocated ==83139== ==83139== LEAK SUMMARY: ==83139== definitely lost: 0 bytes in 0 blocks ==83139== indirectly lost: 0 bytes in 0 blocks ==83139== possibly lost: 0 bytes in 0 blocks ==83139== still reachable: 136 bytes in 4 blocks ==83139== suppressed: 700,725 bytes in 9,375 blocks ==83139== Reachable blocks (those to which a pointer was found) are not shown. ==83139== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==83139== ==83139== For lists of detected and suppressed errors, rerun with: -s ==83139== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)