==125913== Memcheck, a memory error detector ==125913== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==125913== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==125913== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdes -malloc_debug -malloc_dump -memory_info ==125913== Parent PID: 124659 ==125913== ==125913== ==125913== FILE DESCRIPTORS: 9 open (3 std) at exit. ==125913== Open file descriptor 12: ==125913== at 0x100E422D: pipe (pipe.c:29) ==125913== by 0x18AEF07D: ??? ==125913== by 0x140544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==125913== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==125913== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==125913== by 0xE67ED38: PetscInitialize (pinit.c:924) ==125913== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==125913== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==125913== by 0x1362FD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==125913== by 0x12FEAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==125913== by 0x132732: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==125913== by 0x13262E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==125913== by 0x132C41: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==125913== by 0x12E6B0: main (TestCellBasedEllipticPdes.cpp:18) ==125913== ==125913== Open file descriptor 8: /dev/shm/open_mpi.0000 ==125913== at 0x100E8BCC: __open_nocancel (open64_nocancel.c:39) ==125913== by 0x1006CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==125913== by 0xE528822: ??? ==125913== by 0xE52896F: ??? ==125913== by 0x140F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==125913== by 0x140F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==125913== by 0x140AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==125913== by 0x140542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==125913== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==125913== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==125913== by 0xE67ED38: PetscInitialize (pinit.c:924) ==125913== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==125913== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==125913== by 0x1362FD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==125913== by 0x12FEAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==125913== by 0x132732: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==125913== by 0x13262E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==125913== by 0x132C41: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==125913== by 0x12E6B0: main (TestCellBasedEllipticPdes.cpp:18) ==125913== ==125913== Open file descriptor 115: ==125913== ==125913== ==125913== Open file descriptor 110: ==125913== ==125913== ==125913== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdes_valgrind.txt ==125913== ==125913== ==125913== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==125913== ==125913== ==125913== ==125913== HEAP SUMMARY: ==125913== in use at exit: 700,770 bytes in 9,378 blocks ==125913== total heap usage: 80,336 allocs, 70,958 frees, 1,358,811,902 bytes allocated ==125913== ==125913== LEAK SUMMARY: ==125913== definitely lost: 0 bytes in 0 blocks ==125913== indirectly lost: 0 bytes in 0 blocks ==125913== possibly lost: 0 bytes in 0 blocks ==125913== still reachable: 56 bytes in 3 blocks ==125913== suppressed: 700,714 bytes in 9,375 blocks ==125913== Reachable blocks (those to which a pointer was found) are not shown. ==125913== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==125913== ==125913== For lists of detected and suppressed errors, rerun with: -s ==125913== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)