==130381== Memcheck, a memory error detector ==130381== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==130381== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==130381== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==130381== Parent PID: 124659 ==130381== ==130381== ==130381== FILE DESCRIPTORS: 9 open (3 std) at exit. ==130381== Open file descriptor 12: ==130381== at 0xF08022D: pipe (pipe.c:29) ==130381== by 0x18AEF07D: ??? ==130381== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==130381== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==130381== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==130381== by 0xF630D38: PetscInitialize (pinit.c:924) ==130381== by 0xE89C69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==130381== by 0xE89C6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==130381== by 0x140260: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==130381== by 0x1396C7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==130381== by 0x13C522: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==130381== by 0x13C3C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==130381== by 0x13CA59: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==130381== by 0x1379C0: main (TestOnLatticeSimulationWithPdes.cpp:19) ==130381== ==130381== Open file descriptor 8: /dev/shm/open_mpi.0000 ==130381== at 0xF084BCC: __open_nocancel (open64_nocancel.c:39) ==130381== by 0xF008C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==130381== by 0xE8D4822: ??? ==130381== by 0xE8D496F: ??? ==130381== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==130381== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==130381== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==130381== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==130381== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==130381== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==130381== by 0xF630D38: PetscInitialize (pinit.c:924) ==130381== by 0xE89C69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==130381== by 0xE89C6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==130381== by 0x140260: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==130381== by 0x1396C7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==130381== by 0x13C522: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==130381== by 0x13C3C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==130381== by 0x13CA59: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==130381== by 0x1379C0: main (TestOnLatticeSimulationWithPdes.cpp:19) ==130381== ==130381== Open file descriptor 115: ==130381== ==130381== ==130381== Open file descriptor 110: ==130381== ==130381== ==130381== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==130381== ==130381== ==130381== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==130381== ==130381== ==130381== ==130381== HEAP SUMMARY: ==130381== in use at exit: 700,770 bytes in 9,378 blocks ==130381== total heap usage: 2,341,260 allocs, 2,331,882 frees, 1,789,386,027 bytes allocated ==130381== ==130381== LEAK SUMMARY: ==130381== definitely lost: 0 bytes in 0 blocks ==130381== indirectly lost: 0 bytes in 0 blocks ==130381== possibly lost: 0 bytes in 0 blocks ==130381== still reachable: 56 bytes in 3 blocks ==130381== suppressed: 700,714 bytes in 9,375 blocks ==130381== Reachable blocks (those to which a pointer was found) are not shown. ==130381== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==130381== ==130381== For lists of detected and suppressed errors, rerun with: -s ==130381== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)