==255555== Memcheck, a memory error detector ==255555== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==255555== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==255555== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==255555== Parent PID: 253785 ==255555== ==255555== ==255555== FILE DESCRIPTORS: 9 open (3 std) at exit. ==255555== Open file descriptor 12: ==255555== at 0xEC2D22D: pipe (pipe.c:29) ==255555== by 0x18AF107D: ??? ==255555== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==255555== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255555== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255555== by 0xF547D38: PetscInitialize (pinit.c:924) ==255555== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==255555== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==255555== by 0x2D5D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==255555== by 0x2CBBE1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==255555== by 0x2D0166: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==255555== by 0x2D0061: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==255555== by 0x2D0675: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==255555== by 0x2CA3A0: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==255555== ==255555== Open file descriptor 8: /dev/shm/open_mpi.0000 ==255555== at 0xEC31BCC: __open_nocancel (open64_nocancel.c:39) ==255555== by 0xEBB5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==255555== by 0xE528822: ??? ==255555== by 0xE52896F: ??? ==255555== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255555== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255555== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255555== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==255555== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255555== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255555== by 0xF547D38: PetscInitialize (pinit.c:924) ==255555== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==255555== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==255555== by 0x2D5D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==255555== by 0x2CBBE1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==255555== by 0x2D0166: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==255555== by 0x2D0061: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==255555== by 0x2D0675: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==255555== by 0x2CA3A0: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==255555== ==255555== Open file descriptor 116: ==255555== ==255555== ==255555== Open file descriptor 112: ==255555== ==255555== ==255555== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==255555== ==255555== ==255555== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==255555== ==255555== ==255555== ==255555== HEAP SUMMARY: ==255555== in use at exit: 700,770 bytes in 9,378 blocks ==255555== total heap usage: 58,722 allocs, 49,344 frees, 1,355,228,183 bytes allocated ==255555== ==255555== LEAK SUMMARY: ==255555== definitely lost: 0 bytes in 0 blocks ==255555== indirectly lost: 0 bytes in 0 blocks ==255555== possibly lost: 0 bytes in 0 blocks ==255555== still reachable: 56 bytes in 3 blocks ==255555== suppressed: 700,714 bytes in 9,375 blocks ==255555== Reachable blocks (those to which a pointer was found) are not shown. ==255555== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==255555== ==255555== For lists of detected and suppressed errors, rerun with: -s ==255555== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)