==316917== Memcheck, a memory error detector ==316917== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==316917== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==316917== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==316917== Parent PID: 314941 ==316917== ==316917== ==316917== FILE DESCRIPTORS: 9 open (3 std) at exit. ==316917== Open file descriptor 12: ==316917== at 0xEBEB22D: pipe (pipe.c:29) ==316917== by 0x18AF107D: ??? ==316917== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==316917== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==316917== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==316917== by 0xF549D38: PetscInitialize (pinit.c:924) ==316917== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==316917== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==316917== by 0x12CC48: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==316917== by 0x126C8F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==316917== by 0x129252: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==316917== by 0x1290F3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==316917== by 0x129789: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==316917== by 0x124FC0: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==316917== ==316917== Open file descriptor 8: /dev/shm/open_mpi.0000 ==316917== at 0xEBEFBCC: __open_nocancel (open64_nocancel.c:39) ==316917== by 0xEB73C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==316917== by 0xE528822: ??? ==316917== by 0xE52896F: ??? ==316917== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==316917== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==316917== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==316917== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==316917== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==316917== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==316917== by 0xF549D38: PetscInitialize (pinit.c:924) ==316917== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==316917== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==316917== by 0x12CC48: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==316917== by 0x126C8F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==316917== by 0x129252: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==316917== by 0x1290F3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==316917== by 0x129789: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==316917== by 0x124FC0: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==316917== ==316917== Open file descriptor 116: ==316917== ==316917== ==316917== Open file descriptor 112: ==316917== ==316917== ==316917== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==316917== ==316917== ==316917== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==316917== ==316917== ==316917== ==316917== HEAP SUMMARY: ==316917== in use at exit: 700,770 bytes in 9,378 blocks ==316917== total heap usage: 1,126,037 allocs, 1,116,659 frees, 1,430,872,770 bytes allocated ==316917== ==316917== LEAK SUMMARY: ==316917== definitely lost: 0 bytes in 0 blocks ==316917== indirectly lost: 0 bytes in 0 blocks ==316917== possibly lost: 0 bytes in 0 blocks ==316917== still reachable: 56 bytes in 3 blocks ==316917== suppressed: 700,714 bytes in 9,375 blocks ==316917== Reachable blocks (those to which a pointer was found) are not shown. ==316917== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==316917== ==316917== For lists of detected and suppressed errors, rerun with: -s ==316917== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)