==317515== Memcheck, a memory error detector ==317515== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==317515== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==317515== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==317515== Parent PID: 314941 ==317515== ==317515== ==317515== FILE DESCRIPTORS: 9 open (3 std) at exit. ==317515== Open file descriptor 12: ==317515== at 0x101CB22D: pipe (pipe.c:29) ==317515== by 0x18AEF07D: ??? ==317515== by 0x140544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==317515== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==317515== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==317515== by 0xE67ED38: PetscInitialize (pinit.c:924) ==317515== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==317515== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==317515== by 0x20B8A5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==317515== by 0x203DB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==317515== by 0x20788A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==317515== by 0x20772A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==317515== by 0x207DC1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==317515== by 0x2020A0: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==317515== ==317515== Open file descriptor 8: /dev/shm/open_mpi.0000 ==317515== at 0x101CFBCC: __open_nocancel (open64_nocancel.c:39) ==317515== by 0x10153C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==317515== by 0xE528822: ??? ==317515== by 0xE52896F: ??? ==317515== by 0x140F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==317515== by 0x140F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==317515== by 0x140AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==317515== by 0x140542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==317515== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==317515== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==317515== by 0xE67ED38: PetscInitialize (pinit.c:924) ==317515== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==317515== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==317515== by 0x20B8A5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==317515== by 0x203DB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==317515== by 0x20788A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==317515== by 0x20772A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==317515== by 0x207DC1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==317515== by 0x2020A0: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==317515== ==317515== Open file descriptor 116: ==317515== ==317515== ==317515== Open file descriptor 112: ==317515== ==317515== ==317515== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==317515== ==317515== ==317515== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==317515== ==317515== ==317515== ==317515== HEAP SUMMARY: ==317515== in use at exit: 700,702 bytes in 9,374 blocks ==317515== total heap usage: 9,623,635 allocs, 9,614,261 frees, 2,573,164,874 bytes allocated ==317515== ==317515== LEAK SUMMARY: ==317515== definitely lost: 0 bytes in 0 blocks ==317515== indirectly lost: 0 bytes in 0 blocks ==317515== possibly lost: 0 bytes in 0 blocks ==317515== still reachable: 56 bytes in 3 blocks ==317515== suppressed: 700,646 bytes in 9,371 blocks ==317515== Reachable blocks (those to which a pointer was found) are not shown. ==317515== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==317515== ==317515== For lists of detected and suppressed errors, rerun with: -s ==317515== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)