==317671== Memcheck, a memory error detector ==317671== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==317671== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==317671== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==317671== Parent PID: 314941 ==317671== ==317671== ==317671== FILE DESCRIPTORS: 9 open (3 std) at exit. ==317671== Open file descriptor 12: ==317671== at 0xF19222D: pipe (pipe.c:29) ==317671== by 0x18AF007D: ??? ==317671== by 0x142194CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==317671== by 0x10E1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==317671== by 0x10DB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==317671== by 0xFAACD38: PetscInitialize (pinit.c:924) ==317671== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==317671== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==317671== by 0x1DCE3C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==317671== by 0x1D5113: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==317671== by 0x1D8A1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==317671== by 0x1D88BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==317671== by 0x1D8F51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==317671== by 0x1D3400: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==317671== ==317671== Open file descriptor 8: /dev/shm/open_mpi.0000 ==317671== at 0xF196BCC: __open_nocancel (open64_nocancel.c:39) ==317671== by 0xF11AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==317671== by 0xE528822: ??? ==317671== by 0xE52896F: ??? ==317671== by 0x142BE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==317671== by 0x142BE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==317671== by 0x14274922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==317671== by 0x142192DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==317671== by 0x10E1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==317671== by 0x10DB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==317671== by 0xFAACD38: PetscInitialize (pinit.c:924) ==317671== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==317671== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==317671== by 0x1DCE3C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==317671== by 0x1D5113: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==317671== by 0x1D8A1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==317671== by 0x1D88BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==317671== by 0x1D8F51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==317671== by 0x1D3400: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==317671== ==317671== Open file descriptor 116: ==317671== ==317671== ==317671== Open file descriptor 112: ==317671== ==317671== ==317671== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==317671== ==317671== ==317671== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==317671== ==317671== ==317671== ==317671== HEAP SUMMARY: ==317671== in use at exit: 700,702 bytes in 9,374 blocks ==317671== total heap usage: 6,915,029 allocs, 6,905,655 frees, 8,038,923,768 bytes allocated ==317671== ==317671== LEAK SUMMARY: ==317671== definitely lost: 0 bytes in 0 blocks ==317671== indirectly lost: 0 bytes in 0 blocks ==317671== possibly lost: 0 bytes in 0 blocks ==317671== still reachable: 56 bytes in 3 blocks ==317671== suppressed: 700,646 bytes in 9,371 blocks ==317671== Reachable blocks (those to which a pointer was found) are not shown. ==317671== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==317671== ==317671== For lists of detected and suppressed errors, rerun with: -s ==317671== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)